Microarray Probes on PGSC0003DMT400080659
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50845_PI426222305 |
JHI_St_60k_v1 |
CGTATTCATCTTTTCTTAATGTGCTCACACTTATGGCTCTTACACACCATCTTGTTCACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080659
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080659 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G72100.1 |
+1 |
3e-34 |
127 |
65/116 (56%) |
late embryogenesis abundant domain-containing protein / LEA domain-containing protein | chr1:27127250-27128811 FORWARD LENGTH=480 |
Transcript Sequence (612 bp)
>PGSC0003DMT400080659 612 pgsc_dm_v3.4
ATGCGTTTGATGCATTTGTTGGGGTTTGCTGTGGCTTATGGGATGTGCATTTGGGTTACA
TTTGTTTCGAGTTATGTGTTGGCTAGAGCATTGCCAAGGCAGCAATTTGCAGTTGTTCAA
AGTAAGATTTACCCTGTTTACTTTAAAGCAATGGCTTATTGCGTTGGCCCGGCGTTCATC
GGTCATTTTTTAAGCCAAAAACGTTGGTTTTACGCTAACTTGGGTGAAGCGGTTCAAGGT
TTTAATCTTCTAGCTTCAATCTCCATGCTTTTGGTTAATTTGCTATACTTGGAGCCTCGC
GCAACGAAGGTTATGTTTGAGAGATTGAAGTTGGAGAAGGAAGAAGGTAGAGGTAGACAC
ATATTCAACGTCGAACCAAGCAGTACTAGAGGAGTGGAGTCGGTATTGGATCCAACAAAG
ACGACAACAACTAAACCAGCAGAAAAATCTCCAGAGCAGTCCGCAGCAGAGGTAGTGAAG
CCCCAAGTGGTGAAATTGAGCCAGAAGCTTAAGAAGTTAAACTCGTATTCATCTTTTCTT
AATGTGCTCACACTTATGGCTCTTACACACCATCTTGTTCACCTTACTCAGCTACTCAAT
GCCGCCACCTGA
