Microarray Probes on PGSC0003DMT400079776
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40937_PI426222305 |
JHI_St_60k_v1 |
TAATCTCACACTTCCTCATCAACATCCTTACCCTGATGCTGTGGTTCAAGAAGTACAGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079776
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079776 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G04310.1 |
+1 |
0.0 |
624 |
289/402 (72%) |
Pectin lyase-like superfamily protein | chr5:1203356-1207352 REVERSE LENGTH=518 |
Transcript Sequence (1608 bp)
>PGSC0003DMT400079776 1608 pgsc_dm_v3.4
AAATCTCTTCCCTCCATTGAGAGAGTTCCTTTTACACAAGAAACACAACAACAAATACAA
AGAATATATAAATTCATTCAATCAATTTTTGTGATACTAGCAAATATGTTTTCTGTCATA
TGCATTCTCTTGTTTTGTTTGTTAATCTCTTTTTTTCCTCAAATTATAGTTTCCTTTAAT
CTCACACTTCCTCATCAACATCCTTACCCTGATGCTGTGGTTCAAGAAGTACAGAGGAAA
GTGAACGAATCGATTTCGAGAAGGCAACTATGGAACACCACCATGAATGCCATAACTACC
CAATGTGAAACCGGAAATCCCATAGACGATTGCTGGCGCTGCGATCCAAATTGGTCGAAA
AACCGGCAGCGCTTAGCCGATTGCGCAATCGGCTTCGGCCAGAACGCAATCGGAGGTAAA
AACGGCAAATACTACGTCGTTTCCGATTCCTCCGATCTCGACACCGTAAATCCAACTCCG
GGAACACTCCGGTACGCCGTAATCCAGGAAGAACCACTCTGGATCATCTTCTCCGGCGAT
ATGTTCATAAAATTGAAACATGAACTCATCGTTAACAGTTACAAAACAATCGACGGCCGG
GGAGCGAAGGTTCACATCACCGGTAACGGATGTATAACGTTGCAGTATATTAGCAATGTG
ATTATACACAATATTCATATTTACAACTGTTTACCGTCGGGGAATACTGATATACGGTCG
ACGCCGACGCATGTCGGTCACCGGGGTAGATCGGACGGCGACGGGATCTCGATATTTGCG
TCACGGAATATATGGATTGATCATTGTGCATTATCGCATTGTACTGATGGCTTAATTGAT
GCTATCATGGGGTCCACTGGTATAACGATCTCTAATAGCTATTTCAGTCACCATGATGAA
GTTATGCTACTGGGACATGATGATAAGTACTTGCCTGATGCTGGAATGCAGGTGACAATA
GCATTCAATCATTTTGGAGTAGGGCTAGTACAAAGAATGCCAAGATGTAGAAGAGGATAT
ATACATGTAGTCAACAATGATTTTACTGAATGGCAAATGTATGCAATTGGAGGAAGTGCT
AATCCTACTATTAATAGTCAAGGCAATCGATATACTGCCCCACTCGATGCAAATGCTAAA
GAGGTGACAAAGCGCGTGGAGACAGACGAGGGGGAGTGGAGTGGGTGGAACTGGAGAACA
AATGGAGACGTAATGGTAAATGGAGCATTTTTTGTGCCATCAGGTGAAGAAGGACTTGGC
AATCAATACGCGAAAGCCTCGAGCGTGGAGCCCAAATCCGCTGCTATTATTGATCAACTT
ACACTTAATGCCGGTGTTTTTGGTGCCCCAAGGGATAAAAGTATTAGTATATCATATGGA
GGAGGGACCACCACCGGAGCTAGCGGGAGCGGTGGTGGCGGGTCCACCGGCGCCGGCGAT
GATAGTGATTTTTTTGGAATGATGTTTGGGAGCGGCGCACCACAAAAAATATCATCAACC
ACTTATTATACTATCTTATTATCTCATTTAATTATTTTATTTTTGTACACCAACCAATTA
TTTTTAATCTTACTATAGCATTTACTTATATTGTTATATTTATTCAAG
