Microarray Probes on PGSC0003DMT400079708
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45524_PI426222305 |
JHI_St_60k_v1 |
CCCTCTCTGCGTCATCTTTGAATTTCACGTGCAATAATATTTGAAATCTACACCTATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079708
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079708 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G17330.1 |
+2 |
1e-50 |
181 |
95/174 (55%) |
glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502 |
Transcript Sequence (1359 bp)
>PGSC0003DMT400079708 1359 pgsc_dm_v3.4
TCGTGTGGATGTTAGCTTTAATGCTGTCTCCCAATTTCAGGTTCCTATCAAATAATTGCG
CAGTATTATCAGTTAATAAGGCTTGGCTTTGAGGTAATTACCGAAATCACATTAAACACG
ACTCTGTGTTTCTTCAAGTCTGAACAACAATTGCCTGGATTATATTATTTAATATAAGTC
GACAGCTGCCTCTTGCAGATAGATTGCGTACAATAGACCCTTGTGGTCCGGCCTTGCGGG
AGCTTTAGTAAACTGGGCTGTCCCTTATTTCTACACTGCCCTTTTTTCTATTATATTAGT
TGTTAATATAAGTCGAAAGCTGAGTCTCTTAAGGGGTATTTTTAGATCTTATATTGTGCT
TGCTTTGATTATGCAGAACACCTTTGAATTTAGAACACATTTTACTCATAAAGAGTCATG
GAGTAAAACAGTGGAATATTTAGATGATGTTTGTCAACAGCTATGTTCCTTCTGAATTCT
GAGGTGGTTGATAATTCATTTTGTGCAACAAAGTAAACCTGCCATTAATCGTATTGCTTA
AGCACGATACAAATGATTTACACTTTTGCTTCTGGTCTGCAAGGGTTATAAGGACGTCAT
GGAGAATTGCTTAGCAAATACAAAAGTACTAACAGAGGGAATCACAAAAATGGGGCGGTT
CGATATTGTCTCTAAGGATGTGGGTGTTCCTGTTGTAGCATTTTCTCTCAGGGACAGTAG
CAAATATACAGTATTTGAAGTGTCCGAGCATCTCAGAAGATTTGGATGGATTGTCCCAGC
ATACACAATGCCACCGGATGCTGAACACATTGCTGTTCTGCGGGTTGTCATTAGAGAGGA
TTTCAGCCACAGCCTAGCTGAGAGACTTGTTTCCGACATTGAGAAAATTCTGACAGAGTT
GGACACACAGCCTTCTCGTTTGCCCACCAAAGCTGTTCGCGTCACTGCAGAGGAAGTGCG
TAATGACAAGGGTGATGGGCTTCATCAGTTTCACATGGATACTGTAGAGACTCAGAAAGA
CATAATCAAGCATTGGAGGAAGATCGCAGGGAAGAAGACCAGCGGAGTCTGCTAGGTCTA
GCCACACTTGTTTTCTGGGCTCCGCTTCCATCGTCATCCTGTAGTATGTATTACGTGTGT
TGTTTCCATCTAATGTAGTAGTTGGTACCGTAATCTGTAAATGCTTTCATGATCTTGGCT
CTGTATATGTTAATAAGCACTGCATTTCAAGTTCCTGTAAGTATTTATGTATGAATCTAT
CCGTCTGCCATAATTGGTAGAATGCCCTCTCTGCGTCATCTTTGAATTTCACGTGCAATA
ATATTTGAAATCTACACCTATTATAAATGATGTTTTTTT
