Microarray Probes on PGSC0003DMT400079508
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41424_PI426222305 |
JHI_St_60k_v1 |
GTCAAATCACTTGGACTTGTTGCAATATGTTAATCTGAATGGGAATGGGTTTTAACAGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079508
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079508 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G39070.1 |
+2 |
5e-71 |
229 |
120/203 (59%) |
B-box zinc finger family protein | chr4:18205061-18206421 REVERSE LENGTH=242 |
Transcript Sequence (1454 bp)
>PGSC0003DMT400079508 1454 pgsc_dm_v3.4
TTTGTCTCTTTCCCAAATTTACTCCCTTCTATTCTAAGTTTCTAACTATATATATACATC
TCTTTAGGGAAACAGTACAATTATTAAAAAGAAAAAGAAAATGAAGATTCAATGTGATGT
TTGTGATAAAGAAGAGGCATCAGTTTATTGTTCAGCAGATGAAGCCACACTTTGCCAAAG
CTGTGATTATCAAGTGCATCATGCCAACAAGCTTGCAAGCAAACATCTTCGTTTTTCTCT
AATTCATCCTTCTTTCAAAGATTCTCCTCTTTGTGACATTTGCCAGGAAAGACGTGCACT
GCTATTTTGTAAAGAAGATAGAGCAATTCTTTGCAAAGAATGTGACTTGCCTATACACAA
AGCAAATGAACATACAAAGAAACACAACAGATTTCTTCTAAGTGGAGTTCAGCTCTCTTC
TGATGTACTTGCTTCTAATTCTAATAACCAAAATTCAATATCCCCAACTGGATCTGCTGC
AAGTAATGCTGGTACAAATAATTTTAAAGCACGTAGTGGTAATTTTGGGATGAAGAGTAA
TTCGATTTCGAGTACTACAGAATCGACACCTAATTATTTTCAAGTTGATTATCATGTACA
AGAGGGTTCTGTTTCAACTAGTAGCATATCAGAATATTTGACTGAGACTCTTCCTGGTTG
GCATGTTGAAGATTTTCTTGAATATCCCTCTTCTTCTTCATATGGTAAGTGTTTCTTTTT
TTTACGGATTTAACTTATATTCACTGACGATAATGATGGTGACACCTTTTGCAGAGGAAT
GTCACAAGACATCGCTACTTTCTCGTTTTATGTGTATAAAAATGCTACAGACCGACACAA
CTCGAAATATGGGATTAAATTATTAACGAAAGGGGCATTTTTAGACCAACTGATGACATA
TTTGACCATTTTTCGAATACAATAAAATGTTCAGAACTTGCAACTAAATGATGCTGTTTG
ATTGCAGAATTTTGATCAGATACGACCAGCTGTGTAGTTTTTTTTCCACTACAGTAAGTG
GGGATACCTCTTAATATCAAATGGAGTACCTGTTCCTCAGATCAACTCTCCATCTACCAA
GCAACTCATAAGACAGACTTGGTAATACTAAAGGGCATAATATCTTTTGAGATATTAAGA
AAACTGTTATACAAATTGCCATCTGACCTTTTCTTTTGGTTGCTAACTTTGACCAGTTGC
TTTGTTTTTGGACATGTAACACATGTTGTAAGTTAAAGCCCCACTGTTCTTTTTTTTGTT
ATTTGTTTTTTTGCAAGTCAAATCACTTGGACTTGTTGCAATATGTTAATCTGAATGGGA
ATGGGTTTTAACAGATCTGGGGTACTTTTTGTTTTGCTTTGTGGGAGACCAATCTTTTTG
TAATGCTAGTGGGATAGCCTTGTGCCTATTACCCGCTTTGATTATTGAATATGGTATTCC
TATTTGTTTCAAGT
