Microarray Probes on PGSC0003DMT400079474
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41401_PI426222305 |
JHI_St_60k_v1 |
GGGGTTTGTAATCTCATTTTCAGTTTCTCTTTCAGGACTTAATTATGCAGTTGTAATTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079474
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079474 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G34590.1 |
+1 |
4e-28 |
109 |
75/139 (54%) |
G-box binding factor 6 | chr4:16522449-16522928 FORWARD LENGTH=159 |
Transcript Sequence (1348 bp)
>PGSC0003DMT400079474 1348 pgsc_dm_v3.4
CCTCTCTTTTCTCCTTCCTTTTCTCTCTAATTCTTCTTTCCTCTGTTTTTTTGGTTTCAA
GTTTTTCTTGGAATCTCCACCACCCAAAATCTTCCAAAAAAGTTTTTTTTTTCTTCTACT
AAACAAAATCATAAAAGGGGTTTTTGTTTTTAAATCTTTTAAACTAATCTTAATGCTACC
CCAATTATTTTTAATTTTTGAAATTCATGTCTGCAATTCTGAGTGAACTGTTTCTTTCGG
GGTTTATGATAAATTCCACATATAGGCGCAGGACCCATTTGGTGCAATCTTTCTCTGTTG
TTTTTCTCTACTGGTTTTACTTCATTTCATAGCCCCGCCAGCTTAATAACTACTACTATT
TTTATATAATTTTATTAATCTATAAAAATAAAAACTTAAATCTAAAAAAATATTTTTCAT
TCTGCTCTGTTTTTTTTAAATCAAAAACTCCATCTGGGTCCTGCTAATTTTAACTTTATT
GAATATTTTTGGGTCATGGCTTCGTCAAGTGGTACATCATCAGGTTCATCGTTTTTACAA
AACTCGGGTTCAGAAGAAGATCTTCAGCAATTAATGGATCAAAGGAAGAGAAAAAGAATG
ATATCGAACCGCGAATCAGCAAGAAGATCAAGAATGAGAAAACAGAAACATTTGGATGAT
TTGATGGGTCAAGTAACAAATTTAAGAAAAGAAAATAACCAGATTTTGACAAGTATGAAT
GTTACCACACAACATTATCTTAATGTTGAGGCTGAAAATTCAATATTGAGAGCTCAATTA
AGTGAACTTAGCCGTAGGCTTGAGTCACTTAATGAAATCATTACAGTTTTGGATGCAAAC
AACAATTGTAATGGACTTGTCATGGACCACAATGAGCCTTATAGCTTCAATTTTGCACAA
AATGACATTATGCTTGATGGGTTCAACGTGACCAATTCTTGGAATTATCTATCTGCCAAT
CAACCCATTATGACTGCCAATGTCTTGCAGTACTGACGTGGCAATATTAGTCGACCCAAT
GAATTTTAAAAAAAAATTAGTCAGATCATGGTTGATGAGGGAAAAAAAAAATCAAACAGA
GAGAATCCTCTTTTTATGTATTATCATCATCAAGTAGTAGAAATATTAGTGATCTTGCTA
AGATTTCTCTTTTGTCAAGTAGTAGTAGTATTATTATTTTATTAAGAATAAATCCTCTCG
AGGAATATTGGTGTTCTTGTAAATGTGGGGTTTGTAATCTCATTTTCAGTTTCTCTTTCA
GGACTTAATTATGCAGTTGTAATTGGAAAGTTTTTTTCTTGATTTGTAGTTATCGTAGTA
GTATATTAATAACAATTTCAAAAATTGC
