Microarray Probes on PGSC0003DMT400078986
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37445_PI426222305 |
JHI_St_60k_v1 |
TTTTTCATCCACAAGAAGGTCTTCTTTTTGTCTATACACAAGTAACCATGAACATCCTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078986
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078986 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G15580.1 |
+2 |
2e-38 |
137 |
88/201 (44%) |
RING/U-box superfamily protein | chr2:6797687-6798815 FORWARD LENGTH=196 |
Transcript Sequence (960 bp)
>PGSC0003DMT400078986 960 pgsc_dm_v3.4
TTCACTTTATATACATAGAAAAAAAAAGTTGCAAGTGAGTTAGGCCTATATAGTGTATAA
CTTTTTGGTTTTTTTCACTATATTTTTCTTCTTCTCTCTTTCCTCTATTGAGTTTTGTGT
AAAAATGGCTGGTATGCTTCCTGGTGTTGAATGTGCTAGAAGAAGGAGATTTCATCAAAG
TAGTGGATGTATAGATTCATCTAACACCACTGGTTTTTCATCCACAAGAAGGTCTTCTTT
TTGTCTATACACAAGTAACCATGAACATCCTCTCAATTCAAGTTCATCAAAGCAAAGGGG
TGCAACAAGTCAAGCATATCAAGATGAGAAACTAGGTGAAGCTGCAAGAGAAGCCAAGCA
AAGGTTGGATGATAGGCTTAGTGCAAGATGGAAATCACAAAATAAGAGGAGTCCCAATAA
TAGACAACCACCAAACCAAAGCCAAGAGATGTTGGATAATAGGCCAAATTTGCAAGGAGA
AGTATTTTCAAGATTAAAGAAAAGTGGATCAAAGAAGTTCAATTGGGCAAAAATGATTTG
GAAATCTCAAGAACAAGATGAATGTACAATTTGCTTGGATCAATTCAAGATTAGTGATAA
CTTAATGCAATTGACATGTGCCCACAAGTTCCATTCCAAGTGTTTGGTGCCATGGCTAGA
ATCCAATGCACATTGTCCATGTTGTAGAATGACAATAATTTTGACTAGTACTAGTGCATA
ATTAGGAAATTGGAAGGAAGTTGCATGTCTCTTTCTACAACTTGTAGGTGTCCAAGATTT
TCTAAAATGTACAAAAATATATATATAGATATAATAGGTGTCAAGCAATTGAACCTATTG
ACTATTTTTTTATCTTTTAAGAAAAAACTTTATGTAGTGTGAGCTATGGTGGATTGGGAG
AATTTGGGTGAGTTTTAATTATTTTGGCTTTAAATATTGTGTGTTATGTCATTAAATTGC
