Microarray Probes on PGSC0003DMT400078874
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37450_PI426222305 |
JHI_St_60k_v1 |
ACTTTCATAGCAAAGATCTGGCTTGTCTGTCTTGCCTGCAATTAAACTTCATTGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078874
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078874 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G45290.2 |
+2 |
3e-37 |
147 |
84/157 (54%) |
RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=546 |
Transcript Sequence (2380 bp)
>PGSC0003DMT400078874 2380 pgsc_dm_v3.4
ACATGTAAAATAAAATAAAAATGGATTCTTGATTTTGAAGAACTTGAAAATGGGAGAGTG
ACTTTCCAACCTACAAAATAGAAGAAAGACCTCCATTACACTTTCTCCCTCCCCCTCCAT
TTCTCTCTCTAGCAAGAGGAAAAAGGAGTTGTTGATTTCAAAAATCAAAATGGGTTCTGG
GAGTAGTCGTTTGGGGTCACGCTCAAGTCGTTCAAATCGAACAAAAAGAACATTTGCATC
CATTTTTATATGTGGTGCTTCTCCATCTTCTCGTCGTTCAGCTGTTGAGATGGAAGAAGA
TCCAGCTGAAATGCTGGTGGATTCTGCAGAACATGCTGACACTGGAAAGCTCCAAAACTC
TGAGAAGGACCCTTCACCTGATTTTATTCCCTCCCAAGCTGAACGTGGAGCTTCATCTGC
AAGCAATCTGGTAAATAGTGAAAAATCTCCATCTGTAGACCCTTCAAGCAATGTTCAGGG
AGGTAATCGAAGAGAAAACTCAACCAAAGACATGGAATTAGTCACTCAATATAATCCTGG
ACGTAAACGTGGTGAAACTGCTAGTACATCTCGGGATGACCGATCATTTCGCTATCCACT
TTCTTTGAACAGAAGGGCAGACGATGATGTTGTGAATAATGTCGCCACTACAGTGAATGT
AGATGTCTCTCAAGTTTTTGCCGGTTACTCTCATTCTAGTAGTCCATTGTCTCATGGAAA
TGGAGAGTCTTCATCAAGTGAAGATTTTGTTGCAAACCACACAAATGAAATTCTTATCTT
CAATAATTCTGATTCTGTTTCAGTTCTTTCGGATTCTTCAGTTACGCCACATTTGGTGGG
AGATGATATGCGTCAGGATACACCACCTTCAGGTTTCGAATTTCTGGTGTCAGACAGGGA
AGAGGGTGTAAGAGATGGAAGTGCACTTCATGTTGACATGGCGAATGCCTCTCCCACTTT
TTTCTCTAATATTCCTGCTGAAATTAGTAGTCGTGAAGCAAGACGGAATAGTAGAAGACT
TTTTTGGGATTCTTTTTCAAGGAGAAGTCCTAGGAGGCGTGCTGATCCTCGTAACTTCCG
TTTTCCAAATGATAATTCAGACGATATTGCATCTCGTGACAGGTTACTGCTGGACTTTAG
TGATAATTCCCTTCATGAGGGGTCTGGAGGAAATTTTCCATCAAATGGAAGTCGGAATGA
ACGGCGACGGCATTCCAGATCTGAGATGTGGGAAAGACTTCCTGCTGGTCTTATTGCTAG
TGATCATCGAAGTGCCACTTGTCCAAGTGGGATTCACACAGATGGTCCATGTTCATGTGA
GACAATTTTAATGAGTCGAGAATCTGGCAGTCGTGCAAGTATATCCCGAATAGTTATGCT
TGCTGAGGCATTGTTTGAGGTACTGGATGAAATACATCGTCAACCTATGTCGTTGTCCTT
ATCTGTGCTATCACTACCAGCTCCAGAGTCAGTTGTGGACTCATTCCCAGTGAAGAGTTA
CTCAAAACCGGAGGAAGTAGATACTAGCAACAATGTTTTACAGTGTCACATATGCTTGTC
CGAGTACGAGGAAGGAGATAAAATACGAGTTCTACCTTGTCACCATGAGTTTCATTTATT
ATGTGTGGATAAATGGCTCAAAGAGATACATGGTGTATGTCCACTTTGCAGAGGAGATGT
ACGAAATGGTTTCGTTGACAGTTCAGTTTCTAACTCAGCAGCACTTCCTCTTTGAGGTAT
CTAGTATATACTGGGGAGAAAGTGAGGGGAAGAGGGAAAAGGAACGCCTCACTAAAACCT
GGCTCCATAATTTGTTGTTACGAAACAAGAAATTTTGCTATTTATATAGTATCCTATGAC
TTCTGAAGGGATACTGAAGGCTCCTCTTAACGGTGTTTATTTCCCAAAGCATCTTGAGCT
AGGAAGGGTTATATCACCTATCGGGGCATGTTGAACACGGAAGGATCAATTCCCAAGTTT
TCTTCTTTTGCCTTTCCTTATTCTCAACACAGTGTGAGGGAATAAGGGGCCCTCTTCCTT
TTGTCCATTTTCGACGTAGCCCCCATACAATTTTGTGGAGAGCTTGTACAGATGTATATG
GCAGCTTTCGCTCCGCAATGTACCCTTGTTGTGTTGTTGATGTTAAGAAGGCACATTTTA
ATGTTCATTGAGGGAAAAATTACAAATGCAGATGCCACTGAACTTGGTGGTGGCCTTAGG
AAATAGGTGAATTTTCATATGGATTCTCATTAATAGATAGAGATATATATGAAATAGGGA
AAGTTCCAAATCTATTTCTATAATATTATATAGTAGAAACTTTCATAGCAAAGATCTGGC
TTGTCTGTCTTGCCTGCAATTAAACTTCATTGTTTTTTTT
