Microarray Probes on PGSC0003DMT400078022
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22793_PI426222305 |
JHI_St_60k_v1 |
TGTTCATGTGGGCGTTCTCCTCGCTGCTAATGGCAGAGAGTATGTTCTTGGAAGAATATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078022
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078022 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G07350.1 |
+3 |
4e-38 |
145 |
83/109 (76%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2257732-2260101 REVERSE LENGTH=382 |
Transcript Sequence (1749 bp)
>PGSC0003DMT400078022 1749 pgsc_dm_v3.4
CGCAACCCATTCGAGAGCCTTCGCTAATTAGAGAGAGAAAGAGACGCATTTCGATACTAC
GCCATAATCTCTTCACGATGTCGTATTCCAGGAGGTCAAGGTATACTCGTTCACCTTCAT
ACGATCGATATAGCAAGTCTGTCTCGAGGTCCAGATATGTTTCAAGGAGTCGGTCAAGGA
GCTGTGATTCAAGTGATGTTGAGAACCCAGGGAACAATTTGTATGTGACTGGTCTCTCAA
CCCGCGTTAAAGAGCGAGATGTTGAGAAGCATTTTTCTGCTGAGGGAAAGGTTGAAGATG
TTCGTCTTGTTTTTGACCCATGGACCCGCGAATCTCGTGGGTTTGGTTTCGTGACGATGT
CCAGCGTTGAGGAGGCTGATCGCTGCATCAAGTCTCTGAATCGCTCAGTACTTGAAGGCA
GAGTTATCACTGTGGAGAAGGCTAGGAGGAGAAGAGGTAGAACACCTACTCCAGGAAAAT
ATTTGGGGCTTAGAACTGTTCGCGTTCGTCGTGAATCACGAAACTATCCTCATCATTCAA
GGAGTCGCTCTCCTTGTTACTCATCTGAAAGCTACAGGAGCAGGAGCAGGTCTTACTCTC
CATATTACCGACAAGAGCATAGATCATACTCTTATTACAGAGGACGCCAGAGATCTCACT
CATCATATTACAATCGACACCACTGCTACTCAGAATCACCTTATTCTCCTTACTATAGTC
GTGTCAGGTCTTACTCTCGATCTTTATCCCCATATAGTCGGCGTGATCGGTCCTACTCTC
CAGATGACCGTTACTACAGAAGAAGCCGTTACCATGACTATTCTCCCGACAATCATCGGC
GTGATCGTTCCTATTCTCCAGATGACCGTTACTATAGAAGAAGCCGCTACCGTGACTACT
CTCCCGAAAGCCGTGATCTTTCGGACTCTCCAGATGTTCGTGACAACAGAATGAGCCGCT
ATCGCGATTACTCTCCGAACAGTTACTATTATCGAAGGAACCGATATCGTTCCATTTCTC
GGAGCATTTCACCTCGATATCGGAGAAGCTACTCATGCAGTGCATCACCTAGGTGGTCAA
AGAGGAGCTATTCAAGAAGCGTTTCCAGGAGCAGCTGCTCTCGTAGCAGTTACTCTCCTA
ATCCGAAGAAAAGCTCTAAGAAGAGTCGCAGTGTTAGTGCATCTTCCAGATTTGTTTCAA
GGTCTGTTACACCTAGGTCTTCGCCTTCATCATGAAAGGACTACACTACTAGGAAGGTCT
AGTCTGTCACTCTCTGTTGCAAAGAGTTTAAAGTTGTACTAGATTGGTCACTCAAGTAGA
ATTACTCAAGATAACAAATCTGCTTTCCAGCTTATGTGACTGGTGGAAATGAGATCTAGC
TGTACTATTGTGTTTGTAATTTAATGCAGAGGTAATACGGTGTATTGACCGAATATGGAA
ACGACACTAGCATATTAATGTGTACGAAGCCAGTACAGAAATCTCTCAATTTCTTCATTG
CTTTCTAGTGGCTTTTATATGTTGGGTGTGTATAACATAGTATTTCATGGGTTATAACTT
GTGAGTATTCCTGTAACTATATGCGGTGCATGACTATTGAAGTCTTGAACTAGTAGTAAT
TCACACAGGTTTAAATGCTATAGCCTTGATGTAGTAGTTACATAGCTGTTGGCCATGATT
ATATGTTCATGTGGGCGTTCTCCTCGCTGCTAATGGCAGAGAGTATGTTCTTGGAAGAAT
ATACCAAGG
