Microarray Probes on PGSC0003DMT400077052
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37784_PI426222305 |
JHI_St_60k_v1 |
CTTGTTTACGCCTCGTTATAATGTTCTTATGGAAAATCACAAAGAGACATGAGTTTGAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077052
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077052 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G10310.1 |
+2 |
7e-125 |
381 |
245/495 (49%) |
high-affinity K+ transporter 1 | chr4:6392008-6395667 FORWARD LENGTH=506 |
Transcript Sequence (1781 bp)
>PGSC0003DMT400077052 1781 pgsc_dm_v3.4
AATGAAGCCACTTTCATTTTCTTTCTTTAAGATTATGAGTCTTAGGGTAAAGCCATTTTG
GATTGAATTAGGGTATTTCACAACCCTTTCATTTTTAGGTTTCTTAGCTTTGAATTATTT
TTCAAAACCTAGAACCCTACCGTCTTTTCGTCCTCAAAACCTAGATGTTTTTTTCACTTC
TGTTTCTTCAACCACAGTTTCTAGTATGTCCACTATTGAAATGGAAGTTTTCTCAAATGT
TCAACTTGTTTTCATGACCATATTGATGTTTCTTGGTGGGGAAGCTTTTACCTCTTTTCT
TAGACTTAAACTCATCAAGAAAGAAAACAAAGATGAATCTTTTAGTTGCAAAGATTATGA
GCTAGGAAATGTAATAAACGTGGACGATAAGTTAGAAGATGTAATAATAACAAACCCTAT
CGAAGATCATAGTCATCATGATCATCACGATGAAATTATAAAGATTAAATCGATAAGATT
GTTGAGTAACGTGGTTTTTGGATATATTCTAGTTATTATTCTTCTTGGTTCATCGTTAGT
TTCTCTCTATATAATAATCATCCCTAGCGCGAAACAAATCCTTAACAAAAAAGGTCTTAA
TTTACATACTTTTTCACTATTCACCACAGTTTCAACATTTGCAAATTGTGGTTTTGTACC
TACAAATGAAAACATGATGATTTTCAAGCAAAATTCAGGTCTTCTTCTCATTCTTATCCC
TCAAATCCTTCTAGGAAACACTTTGTTTGCTCCTTGTTTACGCCTCGTTATAATGTTCTT
ATGGAAAATCACAAAGAGACATGAGTTTGAGTATATTTTGAAGAACTCGAAACGTATTGG
ATTTTCTCATATTTTTCCATGTTATGAAACAATTAGTATTGCAATTACAGTTGTGGGATT
AATAGTATTTCAATTTGTTGTGTTTTGTTCATTGGAGTGGAATTCTAAAGGTACTTCTGG
ATTGAGTACTTATGAGAAGATTGTGGGATCTTTGTTTGAAGTTGTGAATACAAGGCATAC
CGGTCAATCTGTATTTGATCTTTCAACTTTTACTCCAGCAATCTTAGTATTGTTTGCCTC
AATGATGTATCTATCATCCTATACTACTTTTTTGCCTGTTTACAATTATGAAGAGAAGTC
AGAAAAAATGAAGAAGAGAAAAGGGAGAAGCTTAATGGATTACATATCATTATCACAACC
TTCTTGTTTGGTTATTTTTACCATTCTTATTTGTGTTGTGGAGAAAGACAAAATGAAAAA
TGATCCACTCAACTTCAATGTACTCAACATTCTCTTTGAAGTCATAAGTGCATATGGGAC
AGTTGGAATGTCAATAGGGTATAGTTGTGCAAGGCAAATAAATCCAGATGGCCATTGCAA
GGATGCTACATATGGTTTTGCTGGAAAATGGAGTAATACAGGAAAGTTCATTTTGATAAT
TGTCATGTTCTTTGGAAGGTTGAAGAAGTATAATCAAAGAGGTGGAAAGGCTTGGAAAGT
ATTATAACTTCACAACTATATATGACTACTTTTAACTATCATCTAGGTACAAATTGTATG
TAAAATAAATATTAATGTGCAAGATCTTTGAGCTTTTTCTTTCTTTTGCACTTTTGTTTC
TCCCATGTAATCCTAGTGTAAAACAAGGTATTGGTATATTGTAATATAATCTGATAGTTG
GTTATCTTCCTTGTATGTATGTGAAATTTGTGCTTGAAGTTCCTCCATTTGAACTATTGT
GTACTTGACTAGCACATGTACTGCCTAGTATTGTTAGTGTC
