Microarray Probes on PGSC0003DMT400076705
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22989_PI426222305 |
JHI_St_60k_v1 |
TTCCAATTACCGCGACGACTCTGCTGGTGATACTTATATTGGCAACCTTAGATTTCACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076705
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076705 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G57270.1 |
+3 |
8e-109 |
328 |
182/321 (57%) |
beta-1,3-glucanase 1 | chr3:21191336-21193118 REVERSE LENGTH=340 |
Transcript Sequence (1265 bp)
>PGSC0003DMT400076705 1265 pgsc_dm_v3.4
TGCTATTTCATCCACAACTCAATTTCCTTTTCTTTGCCATGGCTTGTACCAAACTACATT
TTCCAATTACCGCGACGACTCTGCTGGTGATACTTATATTGGCAACCTTAGATTTCACAG
GAGCACAAACAGGAGTTTGTTATGGAAGAAATGGGAATGGATTACCATCTCCAGTAGATG
TTGTGGCTCTATGCAATCGAAACAATATACGAAGAATGAGAATCTATGATCCTCATCAAC
CAACTCTCCAAGCCCTTAGAGGTTCGAATATTGAACTCATACTAGGCGTGCCAAATCCTG
ACCTTCAGAATATCGCGTCTAGCCAAGCTAACGCGAATGCTTGGGTCCAAAACAATGTTA
GGAACTATGGTAATGTCAAGTTCAGGTATATAGCTGTTGGAAATGAAGTTAGTCCATTAA
ATGGTAACGCGCAGTATGTACCTTTCGTGATCAATGCAATGACAAACATTCAAAACGCGA
TTTCTGGTGCTGGTCTTGGAAACCAGATCAAAGTTTCTACTGCTATTGAAACCGAACTTA
CTACAGATACTTACCCTCCATCAAGAGGCAAGTTTAAAGACAACGTCCGAGGATATGTTG
ATCCCATCATCAGATTCTTAGTAGCTAACCGTTCACCTTTACTTGTCAACATATATCCTT
ACTTTGCAAAAGCAAACAATCAAGCTATTCAGCTTGACTACGCGCTGTTTACATCCCCTG
GAGTTGTTGTAAATGATAATGGAAGAGAATACCGCAACCTGTTTGATGCACTCTTAGATG
CTACATACTCAGCCCTTGAAAAAGCCGGTGGCTCATCTTTGGATATCGTTGTATCAGAGA
GCGGTTGGCCTTCAGCTGGAGCAGGGCAATTGACGTCCATTGACAACGCAAAGACTTACA
ACAACAACTTGATTAGACATGTGAAAGGAGGGAGTCCGAAAAGACCATCAAAGCCAATTG
AAGCATACATTTTCGCGCTGTTGAATGAAGATCTGAAGAGCCCTGAAATTGAGAAACATT
TTGGACTGTTTACAGCAAGCAGGCAGCCAAAATACGCGATCAGTTTCAACTAGCTAGACT
ATGCTAGATAATTAACGGAATAAGAGTTGTCGATCTTCTCTCTTTATAATATGTAGTTGA
ATAATCGAATCGTTGCTCAACTTGAACGGAGAGCAACCCTTCGCGTGATAACTGATGTGT
ACTCATCCTACATGCTTATATAAAGCAATTATCTATATCTGAACTTCTTTTCCTCTGAGT
GTGTG
