Microarray Probes on PGSC0003DMT400076444
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15892_PI426222305 |
JHI_St_60k_v1 |
GTTATTAATGCAAGTTATACTCTCGTGGGTGACACCATCTTCCATTCCATACATTCTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076444
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076444 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G20970.1 |
+1 |
4e-22 |
92 |
53/124 (43%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:11215259-11216212 FORWARD LENGTH=190 |
Transcript Sequence (791 bp)
>PGSC0003DMT400076444 791 pgsc_dm_v3.4
AAAAAACAAAAACAAATTTGAATCCCAAAGTTGATCATACCAATCAAATGTCATATAAAA
TAGTACTAACACATCAACTTTCAAAGTAGTGTGGCACTCGTAATCTTCAAATTAAATCCT
GGATCCGCTTCTGAATCCTTAACAAAATGTTAAGTAGTTAGTTATCTGTGGTTTAATTTG
CAGGAATTTTTGTCACTGCCGGATCAACTGGAAGAAGCCGCGAATTACATAAAGAAACTG
CAGATAGATTTGGAGAAAATGAGACTCAAAAAAGAAAGCTTAACAGCAGCTGTTGGTACT
TTAAATTCAAATTCAAGCAGTAATACTAATGGGAGAACATTGGAAAATACATTGCCATTG
CCACATATAGAAATTCACAGTGTGAATGCAGCTCTAGAAGTTCTTCTAATTACTGGTTTA
GATTATCACTTCATGTTCAACCATATCATACGTATGCTTCATGAAGACGGCGTACAAGTT
ATTAATGCAAGTTATACTCTCGTGGGTGACACCATCTTCCATTCCATACATTCTAAGGTG
GGAGAAAGTGCAACGTCGTCGTCAGGATACGGAGCTGCAGCAAAGATTATCTCAGAGAAA
TTAAAGCAGTTTGTGGGTGCAGCTGCTACCTAGCAACCAACCAAGTTATAATGTTTTCTA
TATTTTGGGCACGTGTTAAATTATCTAGCTAGCTGTTTTAGTACTTGTTCAAGGACAAGG
TTTATAATTTCCTGCATGATGATTGAAGTTCGACTCTTGGGTTTTCCAGTTAATTTATAA
TAACTATTTAT
