Microarray Probes on PGSC0003DMT400076189
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38628_PI426222305 |
JHI_St_60k_v1 |
CCTCTCCAATAAATCTTGGAATATATCCCAGTGTATTTGGTACTCATGATTAATGGGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076189
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076189 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G66430.1 |
+2 |
1e-74 |
232 |
127/279 (46%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:26525410-26526799 REVERSE LENGTH=354 |
Transcript Sequence (1432 bp)
>PGSC0003DMT400076189 1432 pgsc_dm_v3.4
ACACATTATAAAAAAAATCAAGGAGGAAAAAATAATAATTACAAAGTAGAAATGAAGGTT
GTTGAAGTTCTTCACATGAATGGAGGAGATGGAGACATTAGCTATGCAAACAATTCCTTG
GTTCAGAGAAAGGTGATTCTCATGACAAAGCCAATAACAGATCAAGCCATAAGTGATCTC
TATTGTAGCCTCTTCCCAGAAACATTATGCATTGCTGATTTGGGTTGTTCTTCTGGAGCG
AACACTTTCTTAGTGGTATCAGAGCTTGTTAAAATCGTTGAAAAACAACGAAAAAAAACA
CAATCTGCAATCACCAGAGTATTATTTTCGCTTCAATGATCTCCCTGGCAATGATTTTAA
CACGATTTTTCGATCGTTAGGGGAATTTGAACAAAATTTGAAAAAACAAATTGGAGAAGG
ACTTGGTCCATGTTTTTTTAGTGGTGTGGCTGGTTCATTTTATACTAGACTTTTTCCTTC
AAAAAGTTTGCATTTTGTTCACTCCTCTTATAGTCTCATGTGGCTATCTCAAGTTCCTAA
TTTAATTGAAAAGAACAAGGGGAATATTTACATGGCAAGTACAAGTCCACCAAGTGTTAT
AAAAGCATATTAAAAGCAATATCAAAAAGATTTTTCAATTTTTTTGAAATATCGTTCAGA
AGAATTGATGAAAGGTGGGAAAATGGTATTAACATTTTTAGGAAGAGAAAGTGAAGATCC
TTCTAGCAAAGAATGTTGTTATATTTGGGAGCTTTTATCCATGGCTCTTAATGAATTGGT
TTTAGAGGGTTTGATAGAAGAAGAGAAAGTGGATTCATTTAACATTCCTCAATATACACC
ATCACAAGGAGAAGTGAAGTATATAGTTGATAAAGAAGGTTCATTCACTATAAATAAATT
GGAAATTACAAGAGTTCATTGGAATAATGCTTCTAACAATATTGAAAATATTAATAATGA
TGGTTACAATGTGTCAAGGTGCATGAGAGCTGTGGCTGAGCCTTTGCTTGTGAGCCAATT
TGATCCAAAATTGATTGATTTAGTGTTCCAAAAGTATGAAGATATTGTGTCCGAGTGTAT
GGCTAAAGAGAAAACTGAGTTTATAAATGTCACAGTCTCCTTGACCAAGAAAAAGTAAGA
GCGCTTAATGTTAAAGGCGAATCTAAAATAAGTTTAGTGAATTTGTGAAGTCATGAATTT
TACTCAGAATTCACTGAATTTAAATTTTAGATTCGCCATGAAAACCAACTTCCTTCATTT
ATTTAGCATTTTATATGTGTGTGGTGTAAGTGCTAATTTATGTAGTTCTTGTATAATGTG
CTTTTAACTATGCCTCTCCAATAAATCTTGGAATATATCCCAGTGTATTTGGTACTCATG
ATTAATGGGAAAAAAATTATGATTGTGTTGTTTTTATTATATAAGATTAAAG
