Microarray Probes on PGSC0003DMT400075590
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8351_PI426222305 |
JHI_St_60k_v1 |
GGTATCAAATGAAGTTGTAATCACTAAATTTTGTGGGGAGAAGATAGTTTTAGCTTGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075590
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075590 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52190.1 |
+1 |
1e-162 |
488 |
269/553 (49%) |
Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607 |
Transcript Sequence (2339 bp)
>PGSC0003DMT400075590 2339 pgsc_dm_v3.4
GCAAAACTTGGCAGAGGCATATGGTGCCACGAAGAAACTTCATGGAAAATGGGGGAAAAA
GCAACGAAGTAGGGCCAAAACAAATCGTTTTTTCTGCAATATTGCTCTGCTTTTTTGTTT
TATTTGATCAGCTCTTTTGTTTGTATATACCTGTAGTAGACGCTTGGTTGTTATCGCAGT
GTTTAACTGTCAGTGGTGAACTGTGAGTGATGCTAACAAAGTTGAAAGAGGGAGAGGGTT
TTTTTTCTCTCTTGTTTGTTATAGACTGATCGTACACATATGGAGAATTTGTTGTGTGAA
AAAGGTGAAATGATCGAACAGACTTTGCTATTAGATGATTCTGAAACTCAAAAGGGTGGA
TTCAGAACTTTACCTTTCATACTTGGAAATGCGGCTTTGACAAATGCAGCGACGTCTGCT
CTAACTCCTAACATGATCCTGTATTTGATGAATGAATATCACATGGATATGACTACTGGG
TCCAATATTATCTACATGTGGTCAGCAGTTACCAATATCGCTCCAGTTGTTGGGGCGTTT
ATGGCGGATTCTTTTGTGGGTCGGTTCCAGATGATAGGATTGGGATCTGTTGTCACCCTT
GTGGGGATGTTTATGTTTTGGCTGACATCAGTGATTCCGCAAGCAAGGCCCCCGCCCTGT
GTCAATTCCAACAACATTTGCAGATCAGCAGAGATGTTCCAACTCTTCTTCCTGTGTTTC
TCTTTGGGCATCGTTGCCATTGGAGCAGGTGCAGTCAAATCCTCATCTTTAGCATTTGGT
TCTGATCAGTTGAAACGGGAAGTATATCAAGATAATGCGCGTTTAATGGAGAGATACTTC
AGCTGGTACTATGCCTCGTATGCTTTGTCTATCCTGGTTGCTCTCACGTGTCTTGTTTAT
ATCCAAGTCAACATGGGGTGGGCTTTAGGTTTTGGAGCTCCTGTTTTGCTAATGTTGTTT
TCAACTCTTCTAATTTATTTGGGTACTCCATTCTATGTGAAGCTGAAGCCTAAATCGAGC
TTAATCACTGGCCTTTTTCAAGTGATTGTAGCCTCTTATAGAAATAGATGTCTCAAATTG
TCGTCACAGAGTGAAGATATACAATATCATCAGAAAAAAGGGTCAACCGTAGTTCTTCCA
AGTGAAAAACTAAGGTTTTTGAATAAAGCTTGCATTGTACAAGATCCTCGACTAGATTTG
AGCCCAGATGGAGAAGCAATAGATCCCTGGCGTCTTTGCACTGTAGATCAAGTAGAGGAG
CTGAAAGCATTGCTCAAAGTTGTTCCAATCTGGTTGACGGGAGTTGTATTGTCCATAAAC
ATAAGCCAGAACACTTTTCCTGTACTTCAAGCGAATACCATGGATCGACATATTGGTTCA
AGCTTTGAAATCCCAGCTGCCTCCTTTGGCATATTTGCTGTCATCTCTGCTATACTTTGG
ATTGTCCTCTACGATTATCTGATTCTTCCCATTGCATCAAAAATGACTGGAAAGCCTGCT
CATTTCAGCACAAAAGAGAGAATGGGGTTCGGGTTGTTTCTTTCCTTCCTGTCAGTTTTA
GTGGTTGCAGTTGTAGAAGGTGTACGGAGAAGTATCGCAATCAAGGAGGGGTACTTGGAT
GATCCAGAAGGTGTGATCCCTATGTCAGCTATGTGGCTACTTCCCCAGAATTCCCTTACT
GGCTTCGCAGAGGCCCTGCATGCCATCGGCCAAAACGAATTCTACATTTCAGAATTTCCT
AGAAGCATGTCTAGTGTAGCTGCTTCTCTATTAGGAGTTGGTATGGGAGTTGGAAGCTTA
CTAGCTAGCTCTATAATGAGTACTATCGACGACCTGACTAAAAGAGGAGGGGAAGAAAGT
TGGGTATCGAGCAATATAAACAAGGGCCATTACGACTACTATTATCTCGTTCTTGCAGGA
TTTAGTCTGGTTAACATACTGTGCTATATTGTTTGTAGTAAAGCTTATGGTCCATGCAAA
GAAGAGGTGATGGAAGAAGAGAAGCCATGAATGGGTACAAGAACTTGTATATCGTAGCTC
GAAACGCGCCAATCTATTATCCATATAGTGTCATGCCTATTTCCTCATAGCTTGTTAGTA
GTAATATATATACTTTTCGGTTGATCCAGTCCTTTCCTGGATCCGTACATAGTAAGAACT
TAGTGCATCGTTATGTTCTTTTTAACTTCTTTTTTTTATATATACTTATCAGCTGAGCAT
GACTGATGCTAATGTAGGTATCAAATGAAGTTGTAATCACTAAATTTTGTGGGGAGAAGA
TAGTTTTAGCTTGGTGTAAATAACTTTATATACTTGAAGAAGTATATTTTTGTGTAGTT
