Microarray Probes on PGSC0003DMT400074460
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_560_PI426222305 |
JHI_St_60k_v1 |
GCAAATCCTGTAAATTATGTGAGGGTTCAGCTTGGCATCAAAGAGAAGAAGTGGAGGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074460
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Source Transcript PGSC0003DMT400074460 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc09g074110.2 |
+1 |
2e-22 |
92 |
42/49 (86%) |
genomic_reference:SL2.50ch09 gene_region:61291740-61320947 transcript_region:SL2.50ch09:61291740..61320947+ functional_description:AGAP009276-PA (Fragment) (AHRD V1 *--- Q7PVH5_ANOGA) |
| TAIR PP10 | None | - | - | - | - | - |
Transcript Sequence (240 bp)
>PGSC0003DMT400074460 240 pgsc_dm_v3.4
ATGTACAGCAGCAATAATCCAACTAAGATTGCAAATCCTGTAAATTATGTGAGGGTTCAG
CTTGGCATCAAAGAGAAGAAGTGGAGGAAGGCAAATGGTGTTAGCGCGGATATCATTTTA
AATCGGGGAGTCTCCGAGTGGTGGTCCTTCCATGATATCGACTCACTGGATGTAAAAGGC
TTCGGAGGGTTGAGAGGGCCTATGACCATAACTGTATCAGAGGAAACACCGCGTAAGTAA
