Microarray Probes on PGSC0003DMT400074120
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24365_PI426222305 |
JHI_St_60k_v1 |
ATTGGAGAGACTCACTTTACTCTGTTATGGCTCCTAATCCTGCTAATCCCGAGGAAATCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074120
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074120 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06620.1 |
+3 |
2e-127 |
379 |
197/356 (55%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1518 bp)
>PGSC0003DMT400074120 1518 pgsc_dm_v3.4
ACAAAATTTGTGTTTCTCATCTTTTTATTACCTTTTTGAGACATCTTAATTGAAATATTT
GTTTGTTCTCTCCTAAGGGTCGGCTCAAAAGTTCGAGTTTGAGTTCTCTGTGATTTCTGC
TTTAGAAATAGAGAGATTCCAACCAACATAGACCGCATCTTTTCCTATTGTGCTTTCCAT
AAGGATTTAGCGGCTCGAAATTTGAAATCTCTACTTTAGGATACAACTTAAGTGATACAT
TTGTTTTTGCTCTTTCTAAAGGGTATTAAAAAGCAGAGAGATTTCAATCATTTCACCACG
TCATACTAATGGCAGCCTCCAACACACAACAAAACTATGACAAAATTAGTGAACTAAAAG
CCTTTGATGACACAAAAGCAGGTGTCAAAGGACTTATTGATGGTGGAATTACTAAAGTAC
CTCAAATATTCATTCACCCAGAGGCCTTAGAAAAAAAAACCATAAATCCCAAAAATACAC
ATTTCATTTTCCCATTAATAGACCTCCAAAACATCAACCTGAACAATAAAGAAATAGTGA
AACAAATTCAAGAAGCATCAGAGACATGGGGTTTCTTCCAAGTGATCAATCATGGTATTC
CGGTCCCCGTCCTAGACGAAATGTTGCGTGGATCACTACGTTTTCACGAGCAAGATATCG
ACGTTAAAAAGCCATACTATAGTCGAGATGTTGCGAGGAAAGTTATGTACAATTGCAATT
TTGATTTGTTTAGTGAGAAATCTCTTGCAGCAAATTGGAGAGACTCACTTTACTCTGTTA
TGGCTCCTAATCCTGCTAATCCCGAGGAAATCCCCGAGACATGCAGGGAAATTACAATTG
AGTACTCAAATTATGTGATGAATTTGGGCTACACATTGCTTGAATTATTTTCAGAAGGAC
TTGGTTTAAAACCAAACCATCTCAAAGAAATGGGATGTGCTGAGGGACTAGGCATTTTGT
GCAATTACTATCCTAAATGTCCACAACCAGAAGTTGCAATTGGCACAAGTAGACATGCTG
ATAATGATTTTTTCACAGTGCTTTTGCAAGATGATATTGGTGGACTTCAAGTTTTTCACA
AGAATCAATGGGTTGATGTTCCTCCTACTCATGGAGCTTTAGTTGTCAATATTGGTGACA
TTCTTCAGCTTATATCGAATGACAAATACAAGAGCGTAGTGCACAGAGTATTGGCAAATA
AAATTGGTCCAAGAATATCAATAGCAAGTTTCTTCAGCACAGGGCCATTTGCAACTTCTA
GAATTTATGGACCAATTGAGGAGTTATTATCTAAAGATAATCCTCCAAAGTATAGAGCAA
CAACAATGAAGGACTTCTTTGAATATTCTAACAAGAAAGGACTTGATGGCAATTCTAATT
TGTCTCACTACAAAATAATATAAAATTTTGATATGGAGTTAAAATAATGTTTTTTGTTTG
AACCAAAAAAAATAATCTACCTGAAGAATTAAAGATGTTATATTTGTACTTTTGTATTTG
TTTGGTATAATAAAAAAT
