Microarray Probes on PGSC0003DMT400073685
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15392_PI426222305 |
JHI_St_60k_v1 |
TGTTCTTTGACGATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTTCCCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073685
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073685 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15620.1 |
+3 |
0.0 |
825 |
409/561 (73%) |
DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556 |
Transcript Sequence (2286 bp)
>PGSC0003DMT400073685 2286 pgsc_dm_v3.4
GTAACTTCCCATGAAAAATGAACAAACTGCTCTCCCTTTCGCTAATGCTAATCACCCGGC
TCACGTTAGTGAACGCACCTTATTATACAAGTACCAGAAGTTAAAACCCATTTATGGCGG
GAAACCCCATAACCGTTTAAATAAAATCTCTTTGTCTTCATTTTTGTCATTTCTCTGTAA
AATCATCCATGGCTTCTGGGGCGAACTCTTTGATGTGGTTCAGGAAGGGTTTGAGACTCC
ATGATAATCCAGCTTTAGAGTATGCAGCTAAAGGGTCGAAGTTTCTGTACCCGGTTTTCG
TGATTGATCCACACTATATGGAGCCTGATCCGACTGCGTTTTCTCTGGGTTCCTCAAAAG
CCGGGTTGAACCGGATACAATTTTTGCTTGAAAGCCTTGTTGATCTCGATTTGAGTCTTA
AGAAGGTTGGTTCACGTTTGTTGGTGCTCAAGGGTGACCCTGGTGAGGTTTTGATTCGCT
GCTTGAAGGAGTGGAGCATAGGGAAACTTTGCTTTGAGTATGACACAGAGCCCTACTATC
AAGCTTTAGATGAGAAAGTCAAGGGCTATGTTTCTGGAACTGGCGTAGAGATTTTCTCTC
CTGTGAGCCATACCCTCTACAATCCTGCCGATATAATACGTAAGAATGGTGGATCCCCAC
CTCTGAGTTATCAGTCTTTCCTCAAACTGGCTGGGCAACCATCTTGGGCAACAACTCCTC
TTTTAACAACCATATCTTCACTTCCTCCTATTGGAAATACTGGAAGTTTTGCAGTCTCAG
AAGTTCCAACTGTCAGAGAACTTGGTTATGAAGATTTAGCAGAGGTATTATATTACTAGA
TTTCCAATGAAGTCCTTCAGGTGACGTCTTACAAGAAATTTCGGATGCAGGACGAAAGGA
CTCCTTTTAAAGGTGGAGAATCAGAAGCACTGAAGAGATTGAGAGAATCAATTGCTAACA
AGGAATGGGTTGCAAATTTTGAGAAACCCAAGGGTGATCCATCTGCATTTCTAAAACCAG
CAACAACTGTTTTATCACCCTACTTAAAGTTTGGATGTCTCTCTTCCAGGTACTTCTACC
AGTGCATTCAGGACATTCTGAAATGCTCTAAAAAGCATACTTCTCCACCTGTTTCTCTTC
TTGGACAGTTGTTATGGCGCGACTTTTTCTACACAGCTGCCTTCGGGACTCCTAACTTTA
ATCAGATGAAGGGTAACAGAATATGCAAACAGATACCTTGGAAGAATGATGATGAATTGC
TAGCTGCTTGGAGAGATTCCAGGACAGGGTTTCCTTGGATTGACGCCATAATGGTCCAGC
TTCGAAAGTGGGGTTGGATCCACCATCTTGCTCGACACAGTGTTGCATGCTTTTTAACTC
GTGGGGATCTGTTTGTGCATTGGGAGAGAGGACGTCATGTTTTTGAAAGACTGCTTATTG
ACTCTGATTGGGCAATCAACAATGGAAACTGGTTGTGGCTATCATGCTCTTCATTTTTTT
ACCAGTATAATCGGATTTATTCACCAATCTCATTTGGAAAAAAGTATGATTCTGCCGGGA
ACTATATCAGGCATTTTCTTCCTGTTTTAAAAGATATGCCTAAGGAGTACATATATGAGC
CTTGGACTGCTCCCATAAGTGTCCAACGTAAAGCAAAATGCATCATCGGCATAGATTATC
CCAAACCAGTTGTTTCCCATGATTCTGCAAGCAAAGAATGTAAGATGAGACTTGGTGAAG
CATATGCATTGAACAAAAAGCTGAATGGATTGGTCAGTGACGAAGACTTGAACGAGTTAA
GAAGAAAAGCAGACAATGAATCTACCACTCTGGATTCTGTTTCCAGGAAGAAAAAACAAA
AGTTAATTGACTAAGACTACGCCGTTGAAACCGTAGGTGTCTACAAGATCGGCAGCAAGG
CAACCAGTATTTATAGGAGCTACGAAAGAACATTCTCCTCCAACGACATCTCCTTTAAAA
TGATGCCTTAGGTACCTTAACTCAATAGTGTTAAAATGTAGGAATCCTATCCTAGTATCA
TGTGTGTGCCAGGATTCAGGAGATTAGAGTTAACATACTGAGAGAAGGAAAATGAGTGTT
TGTGTGTGACAAAATAGAGAAGCACACATCTGGTGTGTTTTGATATTTAAGTGAATGAGA
TCATTGAGATATTCTAGTCTTCTTTAATAGTGACAACCTGGAAAGAAGAATGTGATGTGT
CCCTGTTGTTCTTTGACGATGTCCTACTCACAATGCATGATACATTTTAGATCTCTTCTT
CCCTTG
