Microarray Probes on PGSC0003DMT400073540
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40747_PI426222305 |
JHI_St_60k_v1 |
CGGCGCAGAGAGAGAGAAGAGAAGAATCAGTTACCTAAATTTCTGAAATGAATACAGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073540
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073540 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G54740.1 |
+3 |
6e-21 |
92 |
54/121 (45%) |
Protein of unknown function (DUF3049) | chr1:20430839-20431738 FORWARD LENGTH=299 |
Transcript Sequence (1222 bp)
>PGSC0003DMT400073540 1222 pgsc_dm_v3.4
TTTTAGGAAAAAAAATCTCAAAGCCCTTATATATATATCCAAATCTTCCAAGCTAAGCCT
CAAAAGCATACTATTATATGATGACGAGCTTTTGCAGTGAAAAAGTCCATCCTTTCTTGT
GTTTATCAAATTCCAAACACAATGGAACACTTCTAGACTCTTCTCTCCCCCGCCTAAATA
TTTTCACCGCCGCTTCAATCGACAGCGACAACTTTGACCCTCAAAACACAACCAATTACT
CCATGACACCGCCAGCCGCCGCAGCGAAAAAGGATCCCGGCGGAATTGGGTTCTTAGACG
AAGTTGGAGGGAGTGTTGATGGATTAATGTCTTGTACAGAGAGTCTCGGTTTCGAGAGCT
CCGATGAGAGGACAGTAGATGATCAAATTGAGGATCTAGGTTATCGTGACGAATTAGCTT
TGTTGTCTAGGAAATCAAATTGTAGCAATAATAATACGGCTAGTACTAATTCAAGGTGCT
GGCAAAGAAGTAATTTGGGGGAGAAGAAAGAAAAGAAGGAGTTTCCACCGCCATTATCGT
CATTAAGTCAAGATGGAAAGCCCAACTTCTTCATGCGTGCGGTGAGGAAAGATGGACGGT
TAGAATTGACAGAGGTGAAAATTGATCGGCCCAAAACTTTCCGTGCTTCCCGCCAAGATG
GACGGTTGAGATTGCATCTAATTCGCGATCTCGAAGAAGAAGAAGAAGAAGATTTTGCCG
TGGAAACAGAGGAAGACGTAGAGGAAGAAGAAGAAGAAGATATTGAAGAGTGGAGGTTTC
CGGTGACGGGAAGTGGAATTGGAGATAGTCATCGGAGATGTTACGGCGACCATGGTAATA
ACCACCACCATCACGACCGTAATTTACATTTGTGGAGGCAACGGTGTGTGACAACTAGGT
GAATGTGAATCTGTTTTTCGTTCAACTACGTACTCTGCCATTTGCAAGGGAATCTAAAAA
AAAATAAAACTGAAAAACTGAGGACCCAATGAAGTTGGAATTAAGAATCTGCAGCGGCAG
CCACTGAAATTAAGAACCTTGAATTGCGCTAGCAGTTGGAAAAAAGCATCGGGATTCTGT
TTTGCAACAGAGCAGTATCGGCGCAGAGAGAGAGAAGAGAAGAATCAGTTACCTAAATTT
CTGAAATGAATACAGTATAAAAAAAATCAAGAATTATTTTTAGTTATCTTGTCATTTCAT
TAATGGTAAATAGAATAAAAAA
