Microarray Probes on PGSC0003DMT400072673
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2084_PI426222305 |
JHI_St_60k_v1 |
TCTCCAGCCAAATGTATGTTTCCCCCTATTTTTGCCTTCTTATGAATGTGTTGCACCCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072673
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072673 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc10g083860.1 |
+2 |
0.0 |
890 |
466/485 (96%) |
evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:62918325-62919809 transcript_region:SL2.50ch10:62918325..62919809- go_terms:GO:0008152 functional_description:UDP-glucosyltransferase family 1 protein (AHRD V1 ***- C6KI43_CITSI); contains Interpro domain(s) IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase |
| TAIR PP10 |
AT2G36790.1 |
+2 |
1e-162 |
480 |
246/480 (51%) |
UDP-glucosyl transferase 73C6 | chr2:15420339-15421826 REVERSE LENGTH=495 |
Transcript Sequence (1993 bp)
>PGSC0003DMT400072673 1993 pgsc_dm_v3.4
TCAGAACCCATAAACTTCAAATCTGACCCCGCTTCCGAGTCTCGCCATAGGATTATAAGC
CTGGTGGTAGTTTTGGCCTTCTAACCTGAGTTCAGAACATTACTAAAGGAAGTTTGAGTT
GCATCTCACTTCCAGAGAGTGATTTTCAACTTTCAAGAAACACTCAAGAAAGCTACTTCA
AATTCTCACACTCTCCTGATTCATCAGGCTAACTGAAGAGGAAAATTTGTATCACTCAAT
GGCTGCTCAAAAATCTCAACTTCACTTTGTTCTTGTACCCTTAATGTCCCCTGGCCATCT
CATCCCTATGGTGGACTTAGCTAAATTGTTAGCACATCATGGTGTAATTGTTTCTATAAT
TTCTACACCCCTTAACACTATCAGATTCAAATCAGGTATTGATTCCTCTATCAAATCAGG
CCTTCAGATTAGAGTACATGAACTCAAATTTCCAGCAGTACAAGTTGGCTTGCCTGAGGG
ATGTGAGAACATGGATTCTTTACCTTCACGCGATTCGATCAGGGATTTCTTTCTTGCTGC
TAGCATGTTGCAAAAACCATTTGAAGAATTGTTCAGTGATCTTAAGCCTAGTCCTTGTTG
CATAATATCTGGGAAAAACATGGCGTGGACTGTCGATAGTGCGCGTAAGTTTAGAGTTCC
TAGGATTTTCTTTGATGGTATGGGCTGTTTTTCTGCTACATGCACACAGAAGTTACAGAG
TTCCAAAGTTCATGAGAATGTGTCAAAGTTTGAGTCTTTTGTTGTACCAGGTTTGCCTCA
TAGAATTGAGCTGACTAAAGCACAATTGCCTGAAAATCTGAATCCAGGTTCACCTGACTT
AGTCGATGTTCGCAATAAGATGGTTGCTGCTGAATCCATCTCAGATGGGATTATTGTCAA
TACATTTGAAGAACTGGAGCTTGACTATGTTAAAGAATTCAAGAAGATCAAAAGTGGGAA
AGTCTGGTGCATTGGCCCTGTCTCAGCTTGCAACAAATCGGAATCTGAAAAGGCTGCAAG
GGGCAAAAATGTGTCTTTGGAACAGAACCAATGCATCAAGTGGCTTGACTTGCAAGAACC
AAACTCTGTGGTTTATGCAAGTCTTGGTAGCATATGTGGCCTAACATGTTCACAGCTTGT
GGAACTTGGGTTAGGCTTAGAAGCATCAAATAGGCCATTCCTATGGGTACTGAGAGGAGG
AGAGAAATCAAAAGAGTTAGAGAAATGGATTGAAGAAGAAAAATTTGAAGAGAGGATTCA
AGGAAGAGGCTTTTTAATAAAAGGCTGGTCTCCTCAAATTCTTGTCTTGTCTCATCCATC
TGTAGGCGCTTTCTTAACGCACTGTGGATGGAATTCGACTCTAGAAGGGTGCTGTTCCGG
TTTACCTATAATTACTTGTCCATTGTTTGCTGAACAGTTTATTAATGAGAAATTGATCAC
ACAAGTGTTAGGCACTGGTGTCAGTGTGGGAGTCAAGGCTGCTGTTGCATGGGGAATGGA
AGAAAAATCAGGACTAGTTATGAAGCGTGAAGGCGTAAAGAACGCCATTGAGACAATCTT
CGATGAGGGTGTAGAAGGAGAAGATCGGCGTAGAAAGGCAAAAGAGATCGCGAAAATGGC
GGAGAGCGCATTAGAGGAAGATGGCTCATCTTACATAAACATAGAGACTTTGATTCATGA
TATTATGCGACAGAGTTTGAGCAGTGTTGAAGCAAGTTCTTGATAATACTTCTTTAGAAA
AGCAACAATTTTTTCAGAATTATATAGTCATATATAAATAAACCATTCCCCCTGAATTGT
GATTTGTGTCATTTAGGAATATAATTTTGTGTGTGTGTGTTTTTGTCTCAATTTGCTTCA
GTAATGTCTGTTCAAGTGTGAAACTTTGAGTTGCTTTAACAGTAAAAACCTATTATTATA
GTTAGCTACTCTTTCTCCAGCCAAATGTATGTTTCCCCCTATTTTTGCCTTCTTATGAAT
GTGTTGCACCCCA
