Microarray Probes on PGSC0003DMT400071690
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8723_PI426222305 |
JHI_St_60k_v1 |
AACCATGGGTGCAATGGAGGGCTTCCATCACATGCGTTTGAGTACATTAAATACAATGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071690
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071690 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G45310.1 |
+1 |
1e-170 |
487 |
233/334 (70%) |
Cysteine proteinases superfamily protein | chr3:16628704-16630473 REVERSE LENGTH=358 |
Transcript Sequence (1326 bp)
>PGSC0003DMT400071690 1326 pgsc_dm_v3.4
ATAAATTCTCCACTATTCCTACCAACCTTATTCATCCAATCCTCTTCCCGAATTACAATT
ACAATGTCACGTTCCTCAGTCCTATTGGTTCTCATCGCCGGCCTTTTCGCCGCTACAATT
ACCGGAGCGGCGACCTTTGCTGATGAGAATCCGATCAGACAAGTCGTTGTTTCGGAAGAA
GTGGAGAACGGAATTCTTCAAGTGGTTGGCGAGAGTGACGACGCTCTCTCCTTTGCTCGC
TTTGTTAACAAGTATGGGAAAAAGTACGAGTCCGTTGAGGAGATCAAGCTAAGGTTTGAG
ATATTTGTGGAGAATCTGAAGATGATTCGATCGCACAACAACAAAAGATCAGGACTATCA
TACAAACTCGGTGTCAATAAGTTTACCGACCTAACATGGGATGAGTTCCGTAGCGTCAAG
TTGCAGGGTACACCTCAAAACTGTTCTGCCACCACAAAGAGCAATCTTAAGTTCACTAAC
GTCATTCTACCAGAGAGGCAAGACTGGAGGGAAATTGGTATTGTTAGCCCAGTGAAGGCA
CAGGGAGACTGCGGAGCTTGCTGGACATTCAGCACTACTGGTGCACTAGAGGCAGCGTAT
GCCCAAGCATTTGGAGAGGGAATCTCTCTTTCAGAGCAGCAGCTTGTGGACTGTGCTGGA
GCTTTTGACAACCATGGGTGCAATGGAGGGCTTCCATCACATGCGTTTGAGTACATTAAA
TACAATGGTGGTCTTGACACTGAAGAATCATATCCATACACCGCCAAGGATGGCATATGT
AAATTCAAACCAGAAAATGTTGGTGTCAAAGTCATCGATTCAGTCAATATTACTGAGGGT
GCTGAAGATGAACTGAAATATGCAGTTGCATTGATTAGGCCTGTTAGTGTTGCTTTTGAG
GTGATAGATGGTTTCAAACAGTACAAGAGCGGAGTTTACACCAGCACTCAATGTGGCAAC
ACTTCCATGGACGTAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGGTGTT
CCTTATTGGCTCATAAAGAACTCATGGGGAGCAGATTGGGGTGAGGATGGATACTTCAAA
ATGGAGATGGGAAAAAACATGTGTGGTGTTGCAACTTGTGCATCCTTCCCAATCGTTGCC
TAATTTAAATTCACGTCATATATCGATTACTAAAATAAAACAAAGAACTATATATTGAGT
TCACCAAGATTATCGATGCATGAAAATCTCTATGTACATGCTTTGCACACGAGTGTATTA
AGAATAAATATGGAAAAGGGTCATATTTGACCTTTTCTTTATTTTCAGTAATAAGTTATA
TTTATC
