Microarray Probes on PGSC0003DMT400071094
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18019_PI426222305 |
JHI_St_60k_v1 |
TTACTCAAAAATGGCAACTGGTTTTCCGTGCCACCTGATCAGAATTCTTTTTTCATCAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071094
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071094 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30040.1 |
+1 |
5e-123 |
365 |
190/367 (52%) |
gibberellin 2-oxidase | chr1:10537769-10539570 FORWARD LENGTH=341 |
Transcript Sequence (1365 bp)
>PGSC0003DMT400071094 1365 pgsc_dm_v3.4
CTAAGTTCCAACAGTTGTAATAAGAAACAAGAAATACTTTGTCTTAGATAGTAACACCCA
AACTCTTGATCTTTTCATTGCTATTCTTCTTCTACCATTGTAAATTTCATCAAAAAAATA
ACAATGGTGGTTTTAACAGAACCAGACATTGATCACTTACCAATAATCATCAACTCTTGC
AAATCCCCCTCTTTCTTCAATGATATTCCTGTGATAGACCTCTCTAAACCCGATTCCAAG
AACCTCATCGTTAAGGCCTGCGAAGAATTCGGATTCTTTAAAGTTGTAAACCATGATGTT
CCTATGGACTTCATAAGTAAACTTGAATCCGAAGCCATTAATTTCTTTTCCTCTCCCCTC
TCTGAGAAGCTAAAAGCAGGGCCTGCTGACCCTTTTGGTTATGGCAATAAACAAATCGGA
CAAAGTGGCGATGAAGCCATTAATTTCTTTTCCTCTCCCCTCTCTGAGAAGCTAAAAGCA
GGGCCTGCTGACCCTTTTGGTTATGGCAATAAGAAAATCGGACAAAATGGCGACATCGGT
TGGGTTGAATACATTCTCCTTTCAACAAACTCTGAATTCAATTACCAGAAATTCGCATCT
GTATTAGGTGTAAATCCAGAAAACATTCGGGCTGCGGTAAATGATTATGTGACAGAAGTG
AAGAAAATGTCATGTGAGATTCTTGAAATGTTGGCGGAGGGATTAAATATTCATCCGACA
AATGTTTTCAGTAAGCTTTTGAAGGATGAAAAGAGCGACTCTGTTTTCCGCCTGAATCAC
TATCCTCCATGTCCTGATATTCAAGAATTCAATGCCAAAAATTTGATTGGATTTGGAGAA
CATACCGATCCACAAATCATATCGGTTTTAAGATCCAACAACACTTCCGGCCTTCAAGTT
TTACTCAAAAATGGCAACTGGTTTTCCGTGCCACCTGATCAGAATTCTTTTTTCATCAAT
GTTGGCGACTCATTGCAGGTGATGACTAATGGAAGGTTTAAGAGTGTGAAGCATAGGGTA
TTGACAAACAGAGTGAAATCAAGACTATCAATGATATATTTTGGAGGACCACCATTGAGT
GAAAAAATAGCACCATTGCCATCACTAATGGAAGGAGAAGAAAGCAGCTTGTACAAAGAG
TTTACATGGTTTGAGTACAAAAAATCTGCTTTCAAATCTAGACTGGCAGAAAACAGATTG
ACCCTGTTTGAGAAATTTGGAGCCTCATAGTGATTTTTCGAACGAGAGACAAAATCAGAA
TTTAAAGTTTATCGTTATATGTACATATTTCAATAGATTTCGCGATAAATATACCATATT
TGGATCAAAAGGGTAGTTGATATCGAAAAACTCAAATGATTTTTC
