Microarray Probes on PGSC0003DMT400070545
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4509_PI426222305 |
JHI_St_60k_v1 |
TCAATGGATTTATACGATACTGTTAATGGGGTTTGGTTAAAAACCCGATCTGTTCCCGGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400070545
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400070545 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G26960.1 |
+1 |
8e-132 |
388 |
224/411 (55%) |
Galactose oxidase/kelch repeat superfamily protein | chr5:9484908-9486149 REVERSE LENGTH=413 |
Transcript Sequence (1179 bp)
>PGSC0003DMT400070545 1179 pgsc_dm_v3.4
ATGAAATCTTGTTTCCCCAATAACCAACACCCACCACCCCACCACCCTACCCCCATCGGA
ACCACCACCATTTTACCCACCGGAACCACCATTGCTGAACTCCCAGATGACCTTCTTCTT
GAATGTCTATCAAGGGTTACTCATTCTTCACTTCCTTCTTTACCTTTAGTCTGTTGTCGT
TGGTCTCTGCTTCTTGATTCCCCCACTTTTCATCTTCTCCGACACCGGCATAACCTTTTA
CGGCTTACCCTTTTCGCTGTTTCGGTTTCTGATGGAGCCCTTTGCACAGCTAGTTACAGA
TTGAACAATGATTGTTCATGGAAGATTTGTTCTTTTACACCGGCGAATGACCCTGTTTTC
GAACATGGGTGTTTTTATTCTTTGTTCTCGCATTCTCGTTTATCAGTTATTGGACGGAAA
ATCTACGTAATTGGACGGACGGCGATGCTCCGGTGTGATACCTGGACTGGTTTAGTAGTT
CCAAGACAAGGACCGGTTTTCCCGAGGAAGAAATTTGCTGCGGCGGTTGTGGGTGGGAAA
ATCTACGTCGCCGGAGGTTGTGCGAGGTCTGCGGCGGTGGAGGAGTATGACCCAACGAGT
AATACATGGAGTGTGGTGGCTAAAGCTCCGAGGAAGAGGTATGGTTGCGTTGGGGCTTCA
GTCGACGGCGTTTTTTACGTCATCGGAGGATTGAAGCTCGGAGGCGCGTCGGGAAATGAA
ATGCTGGTGGCGCGTGGTAGCCGTGCATCTGATGCAGCTCATGTTTACGCTAGCTCAATG
GATTTATACGATACTGTTAATGGGGTTTGGTTAAAAACCCGATCTGTTCCCGGCGGCGGC
TGTGTTGTGGCAGCATTGGAACTTTCGTTCTGGAAGTTTAATGGGTCACGTAAAAGTACC
GGATTCGGCGATTGGTGCAGGATAAAATCGCCGCCGTTGCCGGCGCAAGTCAGATTAGAC
AGTACGGTGAGATTCAGCTGCGTGGGGATCGGAGAAAAGGTGGTTTTAGTACAAGTAAAT
GGTTGTATAGACGATTTGTTGCGGCGGAGTGGGAGGATTGAGAGAGGATTGAAGGAGGGG
TTGGTGTTGGTTTACGACTGTGTCGCCGGAGAATGGAGCCGTGCCGCCGATTTGCCGGAG
GTCATTCGCCGATCAGCCTGCGTCTGTGTTGAGTGCTAA
