Microarray Probes on PGSC0003DMT400069497
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16725_PI426222305 |
JHI_St_60k_v1 |
CGACTTCCTTAGATTCCTCGATACATAGGGAGACATTTTATAACACCATTACATGTATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069497
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069497 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06040.1 |
+2 |
1e-29 |
119 |
63/108 (58%) |
B-box zinc finger family protein | chr1:1828662-1829659 REVERSE LENGTH=248 |
Transcript Sequence (2204 bp)
>PGSC0003DMT400069497 2204 pgsc_dm_v3.4
TTTAGTTTAAGACCACTTGATTCAAAAGTCGCTGGCTACTTTCTTAAACTTCTTGATCTG
TCAACCCGAGACTCAAGTGGGAATCTAGGATTTCAATTCTAGAACATAGGTGCACCACAA
AAAAAAAGTATCAAGTGGGAATTGATCCCGAGTTCTCTATTCAAATAACTTAGCATTCAA
CCAATCAAGTGCACCATTTAGCTTTACAAAAAATGTATACCTAAACATCTAGTTTTATGG
AGAAATCATGGGTTCACGTGCCCAAAATTAGCATATAAATTCGCCACTGAGAGGGGGGTA
TGATAATAAAGTTCTTGCTTTTCTAGCTAAAGATATAGGGGAGAGAGGGAGAAATGGAGG
CTTAACAGACTGCTCATCTTAAACCTCATGTCATAACCCATAAGTATTACAAACAAGAAG
AGTTACAGGTTCAATTAGGCGTAGTGAAAATGATTTCATGGCTATGGCCTATGCGGTAGT
TTATATTTTCAATTTCAGAGGGCTCTGGTTCAACATCAAAGCTACAACACAAAATGTGTG
ATAGGCGCACGTCACAAGTTTGTACCTCGCTGGGAAAGTAAGACTAATGTTAAAGCGAAC
AAAAGTATATGAGTGAACGTGTTAACCACTGAGTTTTGAAGTTGGAAACAAAAGATTTCT
TTCATTAAGATTAAAAAACTCATGTTTCCAATTGTTCTATTTTCTGAAAGTAAGATCCAA
CCGAAAATAAAAATATGTTGGCATTGTAACCTATGATGGTGTCAACCCTTTTAAGGACCG
GAAACCTCAAACAAAATTACATGTCTATGTTATTGTAGATGTCTAGGTATACCTTATATT
AGAATAGAAATATGGTTATACCTGTTTTGGAAAGCGTTGAGAAGCAAGAATCAAAAGTGA
TTTTACTGAACATGGTTATACCTGACAAAATGATGTTAACATACCCGGGGAAAAAAGATT
GGAAGTAAAAGATCAATGTTCTTTTCCAGAAATTTTCTGGCAGTCTTTGGAGACTTCCTT
ATAGACATTTTAACTTGAACTATCATGTATGCAGGATAAAGCAGCCTTCATCTTCTGTGT
TGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCT
CGCCAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTG
CAATAAGGAAGCAGTAAAAAACCAACTGGAGCCACAACCACCTCAGCAGAATTCTCAACA
AGTTGGCTTGAAAATGCCTACGCAGCAATTGTCTGGTATCACATCACCATCTTGGCCTGT
CGATGATTTACTAGGATTTCCAGATTATGAGTCTAGTGACAAGGTAAAAAAAACTTATTC
CTTTTACATTTTGCAAGTACCCTATGTTTTCGACTACTTGCGTGGCTGGGGAATTGATGT
GTGGAGGACTTCTCTAGATGAGAAGCTATCATTTTTCTTGGTAAAGCAGCTTATGCATTG
AACTTGAATTTGAAACACTTAAATATGCAAAACGACTTCCTTAGATTCCTCGATACATAG
GGAGACATTTTATAACACCATTACATGTATATATGAATTCAGTATTACCGTGTAATTGTC
TATTCATCTAATATGTAATGAATAACCTATATGATTGTTTCAATCTATACAGAAGGATCT
ACTTGAGCTTGGTGAATTTGAGTGGTTAGGAGGCATTGATCTCTTTGGTGAACAAACAGC
AGCTGAAGTACCCGAGCTATCAGTACCTCAGTCGAGCAACACAAATATTTACAGGACAAC
CAAATATCAAATGCCTTACAAGAAGCCCAGATTTGAAATCCCAGATGAAGATGAGTATTT
TACTGTCCCAGATCTTGGTTGAACACCAACTTCAAGAAGTTCCTAATTAAAAGTACGTGT
GCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAG
AAAAAGTATTGTTCTGCTGAACTCTTAAGATACTCCTTATCTTGCTTACTTTTGCAGTGC
GCTCATATTGTCAACAGATATGTTCAGTAAGTAGAGGAAACATTATTCTGCATAAGATAT
CCTTTATCTTGCTTAATTACTTTTCGCTTCTCGGGTTGAATTGCATCAGTTTCTTATTCT
TATGGCAACATAAAAACATATTGAGGCATTCTTGGACATGCTGA
