Microarray Probes on PGSC0003DMT400067951
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39742_PI426222305 |
JHI_St_60k_v1 |
AGTTCAAGATTGGAGAATATGTGTTGGCGCATTTGGCATCTTGCTCGCAAGAAGAAACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067951
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067951 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G04920.1 |
+2 |
0.0 |
1552 |
804/1074 (75%) |
sucrose phosphate synthase 3F | chr1:1391674-1395756 REVERSE LENGTH=1062 |
Transcript Sequence (3610 bp)
>PGSC0003DMT400067951 3610 pgsc_dm_v3.4
CAAGAACACCCACAAAAAAAAAATTCAAAATTTTTTTTTTCAAGAATTTTAATTTTTTTG
AAAAAAAATCCAATCTTTGATGTAAAGATTGAATCTTTTCAATCTTTTAGTGAACCCCAT
TGTTTTGTTTTTCATTTTTTTGAGGTTGGTAAGTGAGAAATAGCAAAAAATGGCTGGTAA
TGAATGGATAAATGGTTATTTAGAAGCTATATTGAGCACTGGAGCTTCAGCTATTGAGGA
TAAAACACCATCATCGACAACAACATCATCACATTTGAATTTGGCAGAAAGGGCTAATTT
TAATCCAACAAAATATTTTGTTGAAGAAGTTGTTACAGGGGTTGATGAAACTGATCTTCA
TAGAACATGGATAAAAGTTGTAGCTACAAGGAATACAAGGGAGAGAAGTTCAAGATTGGA
GAATATGTGTTGGCGCATTTGGCATCTTGCTCGCAAGAAGAAACAGTTGGAATGGGAAGA
CCTCCAGAGGTCTGCAAACAGAAGATTGGAACGAGAACAAGGACGCAAAGATGTTACAGA
GGACATGTCAGAAGACTTATCTGAAGGGGAAAAGGGTGATGTTTTAGGGGAGACACCAAC
ACTTGACAGCCCGAGGAAAAGGTTTCAGAGGAACTTTTCCAATTTGGAAGTGTGGTCAGA
CAGTAACAAGGAAAAGAAGCTTTATATCATCCTAGTTAGTTTGCATGGATTGGTCCGAGG
TGAAAATATGGAGCTTGGTCGTGATTCTGATACAGGTGGTCAGATTAAATATGTTGTGGA
GCTTGCTAAAGCACTTGCTAAGATGCCTGGTGTATATAGAGTTGATCTGTTCACTCGCCA
AATCGCGTCAACTGAAGTAGATTGGAGCTATGGTGAGCCCACAGAGATGTTAAACACTGG
TCCTGAAGATGGTGATGACACTGATCTCGGAGAAAGCAGTGGAGCTTATATCATAAGGAT
ACCCTTTGGTCCTCGTGATAAGTACCTCCGGAAAGAATTGCTATGGCCTCATATTCAGGA
GTTTGTAGATGGAGCTCTTGCACACATCATTAATATGTCAAAGGCTTTGGGTGAACAAAT
AGGTGGAGGCCAACCTGTTTGGCCATATGTAATCCATGGTCATTATGCAGATGCAGGGGA
TAGTGCTGCTCTCCTTTCAGGTGCTTTAAATGTTCCGATGGTCCTAACAGGACATTCACT
TGGTAGAAACAAGCTAGAACAGCTTATCAAGCAAGCGAGGCAATCGAAAGAGGATATTAA
TTCCACATACAGGATCATGAGGAGGATTGAAGGTGAGGAGCTCTCGCTGGATGCTGCAGA
ACTCGTTATCACGAGCACCAAACAGGAGATTGATGAACAATGGGGACTATATGATGGATT
CGATGTAAAACTTGAGAAAGTTTTAAGAGCTCGTGCAAGACGAGGAGTCAATTGCCATGG
TCGCTTCATGCCAAGGATGGCGGTTATTCCTCCTGGAATGGACTTCAGTAATGTTGTGGA
TCAGGAGGACACAGCCGATGCTGATGGGGATCTTGCAGCACTCACTAATGTTGATGGACA
ATCTCCTAAAGCAGTGCCCACCATATGGTCTGAGGTCATGCGTTTTCTAACAAACCCGCA
TAAGCCAATGATTCTTGCATTGTCCAGACCAGACCCAAAGAAGAACATAACCACTCTCGT
GAAGGCTTTTGGAGAATGTCGCCCGCTGAGGGAGCTCGCTAATCTGACACTTATAATGGG
AAATAGAGATGACATAGATGAGATGTCCGCAGGAAATGCTAGTGTTCTCACAACTGTGCT
GAAGTTAGTTGATAGGTATGACCTTTATGGCCAAGTTGCTTTCCCAAAACATCACAAACA
AAGTGACGTTCCAGAGATATACCGTCTCGCTGGCAAAACGAAGGGAGTCTTCATAAATCC
AGCTTTAGTTGAACCCTTTGGACTGACTCTAATTGAGGCTTCTGCACATGGACTTCCTAT
GGTGGCTACTAAGAATGGTGGTCCAGTCGATATTCATCGGGCACTCAACAATGGATTGCT
TGTGGACCCACATGATCAGCAAGCAATTTCTGATGCACTACTTAAATTAGTATCAGAAAA
GAACCTGTGGCACGAGTGTAGGAAGAATGGTTGGAAGAACATACACCTCTTCTCGTGGCC
CGAACATTGTCGAACATACTTAACTAGAATTGCTGCATGTCGAATGAGACACCCGCAATG
GAAAACCGACAATCCGTCCGATGAACTGGCTGCAGAAGAGTCGTCCCTGAATGATTCACT
CAAAGACGTCCAAGATATGTCCTTGCGACTATCTGTTGACGGAGAAAAGACATCATTAAA
TGAATCATTTGATGCATCTGCAACTGCTGATGCCGTACAAGACCAAGTTAATCGGGTTTT
AAGCAAAATGAAGAGACCGGAGACAAGTAAACAGGAGTCTGAGGGTGATAAAAAGGACAA
TGTTCCTAGCAAATATCCCATATTACGGAGGCGACGTAAATTAATTGTAATTGCTCTAGA
TTGCTATGACACAAATGGAGCTCCTCAAAAGAAAATGATTCAGATTATCCAGGAGATTCT
TAAGACCATTAAGTCCGATCCACAGGTCGCAAGAGTATCAGGATTTGCCATCTCAACAGC
AATGTCGATGTCCGAATTGGCAGCATTTCTAAAATCCGGGAACATCAAAGTAACCGAATT
TGATGCTTTAATCTGTAGCAGTGGGAGCGAAGTGTTTTATCCGGGAACTAGTTCTGAAGA
ACATGGAAAGCTTTATCCTGACCCTGACTATTCATCACATATTGAATATCGATGGGGTGG
CGATGGCTTAAGGAAAACAATTTGGAAATTAATGAATACACAAGACGGTAAAGAGGAGAA
ATCTGTAACTTGTGCTATTGAGGAAGATGTGAAATCAAGCAATTCCCATTGCATTTCCTA
CTTGATCAAGGATCGCAGTAAGGCAAAGAAGGTAGATGATATGAGACAGAAGCTTAGGAT
GAGGGGTCTTCGCTGCCATTTGATGTATTGCAGGAATTCAACAAGAATGCAAGTTGTTCC
TCTGCTTGCGTCTCGGTCACAGGCACTCAGGTATCTATTTGTACGCTGGAGATTGAACGT
TGCAAACATGTGTGTCATCCTCGGTGAAACTGGAGACACAGATTATGAAGAACTTATATC
CGGAACTCACAAAACACTGATCTTGAAAGGTGCTGTCGAGGAAGGTTCAGAAAATCTGCT
AAGAACATCAGGGAGCTACCTAAGAGAAGACGTCGTTCCACCAGAGAGCCCACTGATCAC
CTTCACCAGTGGAAACGAAACAGTTGAAGAGTTTGCCAATGCATTGAGGCAAGTCTCTAG
ATGAGGCACACAAAAATGGTATAATTATACTCATTCCTTACAGAAGGAATTATAACATAC
TATATACAACAAACCTTTTTTTTCCTTTTCTCTTCCATTTTTTTGAGCTTTTACTGTTGG
CAAATGTAAGGAATGCAATAATGTGTATCTCAAGCATTTCTTGATTACCAATCCCATTCT
CTCTTTATGTTGTATGAACAGAGACGAATTCATAATTTAAATTTGATGTATTCAACCTTT
AAAGTTCTTC
