Microarray Probes on PGSC0003DMT400067771
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42108_PI426222305 |
JHI_St_60k_v1 |
CACATTTGCTAACTTGGCTGGAAAAATTTGCTTATTGGAGATGAAGGTCATGATCAATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067771
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067771 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27500.1 |
+3 |
2e-156 |
455 |
223/330 (68%) |
Glycosyl hydrolase superfamily protein | chr2:11752364-11753844 REVERSE LENGTH=392 |
Transcript Sequence (1559 bp)
>PGSC0003DMT400067771 1559 pgsc_dm_v3.4
AGATAGATTTACATCATTAAAGAGGCTTCGTGGCTTGAGATTTAGCTAGGCTGGCAAAAG
GGGCAATGGCCATCCTCTTCTGCAACTTCATCAAGCCTCTTCCCCTGCTTCTTCTTCTTT
CTTTTACAGATTTATTTGCAAGTACACTCAGCCTTGGAATTGGAATTAACTATGGCCAAA
TTGCAAATAATCTGCCAACACCCTCACGGGTCTCGTTTCTCCTCAGATCCCTCAATGTTA
CTAGAGTAAAACTCTATGACGCCGATCCAAACGTGTTAACCGCGTTCGCTAACACGAATG
TTGAATTTGTTATTGGACTTGGGAATGAGTACCTACAAAGAATGTCTGATCCTCAACAAG
CTCAGGCTTGGATTCAACAACATGTTCAACCTTACCATACTCAGACTAGAATCACTTGTA
TTACTGTTGGTAATGAGGTCTTGACGGGTACTGATACACAGCTAAAGTCTTACCTCCTCC
CAGCAATGCAGGGTGTATACCGTGCTCTTGTTAATCTTGGACTTAGCAATGAAATATATG
TGGCACATCCCCACTCGGCAGGGATCTTGGCGAACTCTTTTCCGCCTTCCTCTGGTTCAT
TTCGACAAGATCTTAGTGAATACATTCATGGCATGCTCAATTTCCATGTCCAAACCAAGT
CACCGTTCCTTATAAATTTCTATCCATTCTTTGCATACAAAGACAACCCCAACGAAGTTC
CGCTTGATTATGTACTTTTCCAGCCTAACCAAGGTACGACTGACCCGATCACGAATTTGA
AGTATGACAACATGTTGTATGCACAAATTGATGCAGTTTATTCAGCAATTAAGGCAATGG
GCCACACAGACATTCCAGTTAAGGTTTCCGAAACCGGCTGGCCATCAAAGGGAGACCCGA
ATGAATTTGGAGCAACACCTGTAAATGCTGCACTATATAACGGTAATTTGTTTCAGCGTA
TGCAGCAAAATCAAGGGACTCCAGCTAAGCCATCGGAGCCCATTGATGTTTACGTGTTTG
CACTTTTCAACGAAAATTTAAAGCCTGGTCCAGCATCAGAGAGGAATTATGGTCTCTACT
ACCCTGATGGAACTCCAGTTTATAACATCGGGTTACGAGGATTTCTTCCACGTATGGACT
ATTCAGCTGCTAAGAAAAATGCCTTTTCTTTTTCTGCTCTTCTTCTGCTTATGATGATTT
TCTTGATACACTTCTGAACGCTGTACGATAGATCAACTATGGAGATTAGAGATGATTCAA
TTTTTTCAGGAACTTTCGCTGATAGATATTAAACGGTAGTCGTAGACGGCGCAGTTTTTA
TTATTTTCTGTTTTCACATTTGCTAACTTGGCTGGAAAAATTTGCTTATTGGAGATGAAG
GTCATGATCAATATATACATTGTGTATTCATACCAAAAAAAAAAAAAACATAGAATATAT
AGAGACTCTCAGAAAAAAAAAAAGTTTGTTAACTACTTTTATTAGTTGAATAGTTGATTC
ATTTACAAAATTTTAATAATAAGAACAGAAATATTTGTCTGGCAATAGTTGTCATCCCA
