Microarray Probes on PGSC0003DMT400067586
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33229_PI426222305 |
JHI_St_60k_v1 |
TAAGGTGTTTGTGCATCCAAAGTTCCACTCTCCTAGCAAACCCGATCAATACAGAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067586
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067586 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36690.1 |
+1 |
3e-73 |
239 |
120/307 (39%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr2:15379930-15381987 FORWARD LENGTH=366 |
Transcript Sequence (1500 bp)
>PGSC0003DMT400067586 1500 pgsc_dm_v3.4
AAAAAAAAAGTTAAAATTGTAAATCAAATATCTCCATTGGCAACTAAAGTTGTTGTTCTC
TTATAAATCATCTCCATATTGCATACACAATATACCACCATTTTTAGCTAAAATTAAAGT
TCTTATATTATGACAACTCCAATAATTCAACCATCTATTAGTGTTAAAACACTTTCTGAA
TCGCCAAATCTCAAATCTATTCCTTCTAATTATGTTAACTCTGATATCTATCCCTTTGAT
TTCATTGCATCTGAGCCACATGATTATTCAAACTCCATCCCCACCGTTGATTTTTCGCTA
CTCACATCCACTGATCCTCATCAACGGTCTCAAGCTATCAACAATCTTAATAAAGCTTGC
CAAGATTGGGGATTTTTCACGGTGGTTAACCATGGGATACAAGAAAGTTTGATGAAGAAA
GTGATTGATGGTACTCAAGAATTTTTCAATTTAAGAGAGGAAGAGAAGAAAGAATTTGAA
GGGAAACATGTTTTGGATCCTATAAGGTATGGGACAAGCTTCAATACCTCTAAGGAGAAA
GCTTTCTTTTGGAGGGATTATCTTAAGGTGTTTGTGCATCCAAAGTTCCACTCTCCTAGC
AAACCCGATCAATACAGTGATATTATGTGGGAGTATTGTCAGAAAGTTAGACAAGTAACA
AAAGTATTACTTGGAGGAATATCACAAGGTTTAGGACTTGAAGAATGTTATTTGGAAAAA
ACTCTAGAGATGAAGTCAGGATTTCAAATTTTTATTGCAAATTATTACCCATGTTGTCCT
CAGCCAGAACTTGCACTTGGTATGCCACCTCATTCAGATCATGGCCTTTTAACTCTAATT
ATTCAAAACCAAGTTGGAGGATTACAAGTTCAACATCAAGGCAAATGGATTCATGTCAAT
GCACTACCTAACTCTCTCTTGGTCAATACCGGCGACCATCTCGAGATTTTTAGTAATGGG
AAGTACAAGAGCAATGTACACAAAGTAGTGGTGAACAACACAAGTCCAAGAATATCAGTA
GCTGTTGCTCATGGACCATCACTAGAAGCAATTGTAAGTCCTGCTTCCCCATTGGTACAA
AGTGAAACCAATTATATACCAATGAAGTACAAGGATTACATGGAGATGCAACAAAGTAAT
CAACTTCACCAAAAATCCATTTTGGAACAAGTCAAAACTCAAAGGAACTGATTATTTTTT
CCCTAATATAAATTGGGAAATATTTATGTAATAATGTTAGAATCTTAATGTACTGATGCT
TATTATTGAATCCATTACATTTGTGTGTTATATGATTTCATTATATAAAAACAAGGGTGA
CATTCAAAATTGCAACAATTATAAGAGTATCAAGTTGCTAAGTCATACAATAAAAGTTTG
TGACAGGGTGGTGGAGATGAAGGTAATATGATGAGGAGGGGTGTGACTATATATTTTCGT
GAACCAGTTCAGATTTATATCGAAACTTTCCAGTTTTGATGGAGTTGCACTAAGGATCAA
