Microarray Probes on PGSC0003DMT400067458
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36951_PI426222305 |
JHI_St_60k_v1 |
TTGTATTGAACCAAGGTGGTGCCACCGACATCCATGCTGTAGAAATCTATGAGGAAGAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067458
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067458 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17030.1 |
+2 |
8e-73 |
229 |
120/238 (50%) |
expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250 |
Transcript Sequence (988 bp)
>PGSC0003DMT400067458 988 pgsc_dm_v3.4
ATTAGTTTCTCACTTGCTAATTATTTTGTGAACAAAAAAAATGGATCGTTCACTTAAATA
TTCTTGCATTTTTATGTGCATGAATATTATGCTTATGCCAGCATTTTCCTACAGCCAAAC
CTTAGTTTCCAAGGCATCATTTTATAGTACTTCTGATGGCATGGGAACACCATCTGGAGC
ATGTGGTTATGGAGACTATGGTAAAGATGTGAACAATGGTGAAGTGTGCACAGCCTCTAG
GCGTCTCTACAGAAATGGAGTTGGTTGTGGTGCATGTTACCAGGTTAGGTGCAAGAACAA
TGCATTGTGTAGTGAAGAGGGTACAAAAGTTGTGGTGACAGACAGTGCAGATGGACAAGA
AACAGATTTAATTCTTAGCTTTAAAGCCTATGCAAAATTAGCTAAAACTCCAAGTTTGGC
AGCTCATTTATGTGGAAAAGGGGTTGTTGACATAGAATATAGAAGAGTTTCTTGTGGTTA
TGGTGGAAATCTTATGGTTAAAATTCATGAACATAGCAAGTATGCTGATTATCTTGCTAT
TGTTGTATTGAACCAAGGTGGTGCCACCGACATCCATGCTGTAGAAATCTATGAGGAAGA
GAGTCAACAATGGATATCAATGAGAAAGGCATATGGGGCAGTGTGGGACTTGTCAAATCC
ACCATGTGGAGACCTTAAAGTAAGGTTTCTAACAAGTACAAGTGTTGAAAGCAAATGGGT
ACAATCAGACAAAGCTGTTATTCCTGCTCAATGGAAAGTTGGACTTACAATTGAAACTGA
CATTCAGCTTACTTAATTAATTAATATATGTACTTAATACTAGTTAATTTGGGTGATTTC
TTGTTTAATTATCTAGCTAATTTGAAAAAAATTAAAAATGTATTTCTGTGTTGTACTTTT
GGCATTAATAGTGGTAACTTGCTAAGTGTTATATGTATGTTTTGTATTTCTGTTGTCGTG
AGAACTATGAATAAAAAGTCGCCATTTA
