Microarray Probes on PGSC0003DMT400067360
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38230_PI426222305 |
JHI_St_60k_v1 |
ATTAACATGGAAAGGTCATAACTCAGTCTACGCAACATCTTGGGTCATAGTCCCCACCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067360
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067360 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G49950.1 |
+2 |
1e-114 |
348 |
189/404 (47%) |
GRAS family transcription factor | chr3:18522570-18523802 FORWARD LENGTH=410 |
Transcript Sequence (1498 bp)
>PGSC0003DMT400067360 1498 pgsc_dm_v3.4
CTCACATATAACATACATCACTTCATCACGAAAAGGGAAATTCTATTTCGGTGAGACTTC
ATCTGATCAATCGTAGTTCAGATTCAAGTTGGTCCTTGCTTCCATTTTATTGTGTTTAGC
ATTATAGTAGAGTCAAGTTTCAATGAACTTCACAACCATTCCCCTCCAAAACCCTAGTTT
TTTCAACAACTCTCAAAGTTCTCTAGCAGGAGCACTACAAGGATGCATTGGGAACCTTGA
TGGAGCATGTTTGGAAAAACTATTACTTCATTGTGCAAGTGCCTTAGAGAACAATGATGT
TACTTTGGCTCAACAAGTCATGTGGGTGCTCAACAATTTGGCTTCTTCTAATGGAGATCC
AAATCAAAGACTCACATCATGGTTCCTTAGGGCATTAATTTCAAGGGCTTCTAGGGTTTG
TCCTAATGCCACAAATCTTCATGGAGGTAGTAATCTTGAAAGGAGATTAATGAGTGTGAC
TGAGCTAGCAGGGTATGTGGATCTCATCCCATGGCATAGATTTGGATTTTGTGCATCAAA
TAGTGTTATTTATAAGGCCATTGAAGGGCAAACAAAAGTTCACATATTAGATTTTAGTAT
CACTCATTGTATGCAATGGCCAACTCTCATTGATGCAATTGCTAAGAGGCCTGAGGGTCC
TCCTTCACTCCGAATATCGGTTCCTTCATGGAGACCACAAGTTCCTCCATTGCTCAATGT
GTCAAGTGAAGAAGTTGGCCAACGTTTGGCAAATTTCGCGAAATTTAGAGATGTTCCTTT
TGAATTCCATGTGATTGAAGACTTGAACTATGACATGTTCTTGAGCCAATTGAATCCTTC
AACTCTTCAAATTAGAGATGATGAAGCTTTGGTTGTGAATTGCCAAAATTGGTTAAGGTA
CTTGCATGATGATGAACAAATTAAGGGTGCAATTTCGTCTCGCGACATATTTCTTGATAG
GGTTAAGGATTTAAACCCTTGTATTGTGACTATTGTTGATGAAGATTGTGATTTGGGAAA
CTCAACTACTTTAACTTCAAGAATAGCCACTTGTTTCAACTATCTATGGATACCCTTTGA
TGCATTAGAGACATTCTTGCCTAAGGATAGTAAACAAAGGCTAGATTATGAAGGTGATAT
TGGCCACAAAATTGAAAACATTATTGGATTTGAAGGGAACCAAAGGATAGAGAGATTAGA
GAGTTGCAACAAGTTCTCACAAAGGATGGAAAATAGTGGTTACATGAGTGTACCTTTTAG
TGAAGAAACAATTAAGGAAGTGAAGTCATTGTTGGATGAGCATGCAAGTGGATGGGGCAT
GAAAAAAGAGGAACATGACATGCTTGTATTAACATGGAAAGGTCATAACTCAGTCTACGC
AACATCTTGGGTCATAGTCCCCACCACCCCATATGGACATGAGTAGCTTATAATAATAAT
AATAAAAAAAGTGGCTAAGTTTTATATTTTTACTTGCAAGTGGTCTTTTAAATATATA
