Microarray Probes on PGSC0003DMT400067358
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38254_PI426222305 |
JHI_St_60k_v1 |
TCGATCATGTGGAATCAACGTCAAGTTGTATTCTTGGTAGATGAGACCCCTGTTCGTGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067358
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067358 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G03210.1 |
+3 |
5e-157 |
447 |
203/292 (70%) |
xyloglucan endotransglucosylase/hydrolase 9 | chr4:1416019-1417197 FORWARD LENGTH=290 |
Transcript Sequence (1116 bp)
>PGSC0003DMT400067358 1116 pgsc_dm_v3.4
AGATAAATTCATAAAACTCTGAAATTTCTTCTAAAATTAAAAAAAAAATGGTGTGTTTTA
ATTGGGTTTCTTTGAGTTTTGTTATGCTGTTTATGGTGGGTTTGGTTAGCTCTGCAAAAT
TTGAGGAACTGTATCAACCCAGTTGGGCTTTTGATCATTTGACAACTGAAGGAGAAATTC
TTAGAATGAAATTAGACCATCTTTCTGGTACTGGGTTTCAATCTAAGAGCAAATATATGT
TTGGGAAAGTTACTGTTCAGATTAAGCTTGTTGAAGGTGACTCTGCTGGAACTGTCACTG
CATTCTATATGTCATCAGATGGACCAACCCACAATGAGTTTGATTTTGAGTTTTTAGGCA
ATACAACAGGTGAACCATATACAGTACAGACAAATGTATATGTCAATGGTGTTGGTAACA
GAGAACAAAGATTGAAGCTTTGGTTCGATCCATCGAAGGATTTCCACTCTTATTCGATCA
TGTGGAATCAACGTCAAGTTGTATTCTTGGTAGATGAGACCCCTGTTCGTGTGCATTCGA
ATTTGGAGCACAGAGGAATCCCATACCCCAAGGATCAACCAATGGGTGTGTATAGTTCAA
TTTGGAATGCAGATGATTGGGCTACACAAGGCGGGCTTGTTAAGACAGATTGGTCACACG
CGCCCTTTGTAGCATCCTATAAAGGATTTGAGATTAACGGTTGTGCGTGTCCAGCAACTG
TTGCATCTGCCGAGAATACTCGGCGGTGCAGCAGTAATGGACAAAAGAAGTACTGGTGGG
ACGAACCTGTTATGTCCGAGTTGAATGTGCACCAGAGTCATCAGCTGATTTGGGTCAGGG
CGAACCATATGGTTTACGACTATTGCACGGATACTGCTAGGTTCCCTGTTGCTCCTGTTG
AGTGCCAGCACCACCAGCACAAGACTAATCATAACTAGGTGTGGAGGAAAATTGGGGTTC
AGTCTTGTATTGTATAAAATGATTAGACAAAAGGAAAAAAATGACATGAACTCCATGTTA
TATATTTTTGGTGCCACTTTATCTTGTAGTATGTAAAAATTTTCATTATCTCTTTGTTTT
GTTCTTTTTAATGAAGTATTTTCATTTGCATTCTAC
