Microarray Probes on PGSC0003DMT400067341
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38260_PI426222305 |
JHI_St_60k_v1 |
GACATTTACTTTGCCAGTACCTAGATGAGAGGATTTAGCTTTCCATATTTCTTATGGAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067341
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067341 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G21390.1 |
+1 |
2e-160 |
241 |
151/448 (34%) |
S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849 |
Transcript Sequence (2672 bp)
>PGSC0003DMT400067341 2672 pgsc_dm_v3.4
AAAACAATGGAGTTGGATAGTTTCTTACCTCTTTTACTGTTAATTTTCTCATGTTCTTGC
TTACCCGTTCTTCCTTGCCAAAATTGTGTCAAAGTTGGCAAATCAATCACTGGGAATCAG
AAATTGGTTTCAGCTGATAGAAGTTTTGCCTTAGGATTTTTCACTCCATCAAATTCAACG
TACACCTATCTTGGCTTATGGTACAACATAATCCCTCAACAAACAGTCGTTTGGGTTGCC
AACAGAGAATCTCCAATCCCACAGAATGCTTCACCAGTTTTCACTATCGGCGATGATGGA
AATTTAGTGATTTTCGATGAAAAAGGCAAACTCATCTGGTCATCAAATGTCTCATCAACA
GCACCGGAATCATTATTAACTTCAAATTCTACTATCGGAATATTGTTAGATAACGGGAAC
CTTGTTCTTCGACACTACGGTGAGTCCACTTATTTGTGGCAGAGCTTCCAGTATCCTACA
GATACGCTATTACGCCATATGAGATTTGGTTTCAATAAAATTAGTGGCTTACGAAATGTG
ATCACTTCATGGACAAGTAATGACGATGCTCGCCCTGGAAATTTCTCTTTTGGAATAGAC
CCTACTGAAGGGGTTATGCGTTTTGTCATTTGGAACCGAAACGGTATTTATTATAGATTT
GACGATAGTTGCAGAGCGTATATACTAGCAACAGTGTGGTGTTTCACTGTTGTTACTGAA
AATGATAATGTATATCTTAATTTAGCTTACTACAGAATCTTTCTGAGATTAAGAATCGTT
CTGAATCCGAGCGGGCACCTTCAGGTGATGGTGTGGAATCGGAATGGAAGTAACAGATGG
AATGTTGAATTTGAAGCACCACAATCTAAGTGTGACCTTTACGCACAGTGTGGTCCGTTT
GGTATCTGTGGGATCAGATCAAGTGGATTATGCAGTTGTTTAGACGGATTTGAACCTAAA
TTTTCGACAGATTGGGCAAATGAGAAATGGATTGGAGGTTGTGTGAGAAAAATAGCGTTG
GGGTGTGATGGTGGAGATGGATTTTTTAAGCACGAGAATATGAAATTGCCAGATCATGCT
GTCTCTTTAGGAAATATGAGCACCGAAGAGTGTGAAACTCAGTGCATTAAGAACTGCTCC
TGTTCAGCTTATGCTTGTACGAAAAACGCCTGTTTTATATGGCATGGAGATTTACTGGAT
CTTGGGCATGACACTACTAACGGCAGAGCTCTCTATGTTCGAGTTCACGTGTTAGAGCTA
GTTACTGATAATCTATCTGGGAATTCAGCTCGAAGATACAAAATTCTCACTGTGAAAATT
GTTTCTGCAATTTTTGCAATCTTGCTTCTTGTTAGTACCTCTGCTTTTATCTTCAAAAGA
AAGCGCTTGAAAAGACGAGATGGACGGAGATTCTGCTTTAGTTAGCTCCATGCCTAGTGG
ATCTTTAGTTGGGAAAGATGATATGAAGTTGGTACAGTACAGCCTGCAGAATATAAGAGA
CGCAACAAACAACTTCCATGAAAGTAACAAACTTGGAGAAGGTGGTTTTGGCCCCGTGTT
TAAGGGATCTTTGGCTGAATTTGGAGACGTAGCCATCAAAAGGTTAAGCAGGAGGTCATC
ACAAGGACTGGAGGAGTTCATGAATGAGTTGAAGCTAATAGCGAATTTGCAGCACAAAAA
TCTAGTCAGCCTCTTAGGATGTTGCATTGAAGGGGAGGAGAAGATATTGATCTATGAGTA
TATGCCCAATTGCAGCCTGGACAAATTTATTTCTGACCCTTCGTTGAAGGTTACACTCGA
TTGGGATACACGTTTTGGGATAATAGAAGGAATTGCTCAAGGAATACTTTACCTGCATAA
GTACTCGAGATTAAAAGTCATCCACAGGGACTTGAAGGTAAGCAACATTCTGCTAGATCA
AGAGATGATCCCAAAAATATCAGATTTTGGAATGGCAAGGATTTTCGGGACTGATCAAAC
ACAGGCCAGTACAAAACGAGTGGTTGGTACATAGTAAGTATAGTAGCCGCTTCTGTAACC
AGTTTTTATGTTACTACCCCTTGTGTATAGCTACTTAAGACTGATTTACGCCAATATGGC
ATAGTGGCTATATGTCTCCAGAATACGTAGTATATGGCCAATTCTCGGAGAAATCAGATG
TATTCAGCTTTGGAGTATTGCTGTTGGAAATCTTGACTGGTGAACGAAACTCAGACTTCT
TCATGACTGAAGTTTGTGTGTCTCTATTAGGATGGGCATGGAAAATGTGGAAAGAAGGAA
GAATGTTGGAGCTAATAGATCCATCAATAAGGGCGACCTGCGACAGTAACAAAACAACAC
GGTCTGTTCTGGTTGCTCTTCTTTGCGTTCAAGAAATTCCTACTGATCGACCAACAATGT
CTGATATAGTTGTCATGTTAAGCAACGAAACAACTCCCATCCCTGAGCCAAAAGAACCGG
CTTTTCGCAGCAGCTGGCGACATCAAAAGTTAAACGATGTTTCCATAAATGAGTTGACAT
TTACTTTGCCAGTACCTAGATGAGAGGATTTAGCTTTCCATATTTCTTATGGAATTAATC
TTATTTTGAAAAGAACCATCTCAAAAATGTTTAGCACTGTAAATAAAAAATCAAAAACCA
ATTAAATTACTCCCTCTGTCCCAGTTTATATC
