Microarray Probes on PGSC0003DMT400067337
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38228_PI426222305 |
JHI_St_60k_v1 |
GATAAGAGTTGTTGAATTTGTTCTAGTACTACTAATCTTCTTAGGGATAGGACCATTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067337
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067337 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27310.1 |
+3 |
8e-31 |
118 |
50/72 (69%) |
B-box type zinc finger family protein | chr4:13675853-13676616 FORWARD LENGTH=223 |
Transcript Sequence (1119 bp)
>PGSC0003DMT400067337 1119 pgsc_dm_v3.4
GAACAATTGGTGTTTTTGACTCAGTTTTCTCTCTCTCCATTTTCTCTGTTTTGCGTTGAA
GTTGTTGCTGTGGTTTAATTTGTTTTGTCATTTTGGAAAAATATAGAGAAACTATGAAGA
ATTGTGAACTTTGTAAGGGATTGGCTAGGATGTATTGTGAATCGGATAACGCTAGTTTGT
GTTGGGACTGTGATGCGAAGGTTCACTCCGCGAATTTTTTGGCGGCGAGGCATTCTAGGT
CTTTGCTATGTCAGGTGTGTCAATCACCGACGGCTTGGTCGGCTGCCGGTGCGAAGCTGG
GGAAGACGGTCTCTGTATGTGAGAAGTGTGTGGATGGGTACTACCATAGGGATGAAGTGG
AGGAGAGTGAGAGCGTGAATGATGAAGGGAGTGGTACGGAGGACGAGGAAACTGATTATG
AAGAGGATGAAGAAGATGAGGACGAAATTGATTCGGAGGGTATTCAGGTTGTTCCGTGGT
CAAATACGACGCCTCCACCGCCGGCTAGTTCATCCAGCAGTGAAAATTCATCAAATGGCT
GTAGAAACGTCTCTTCAAAGCGAATGCGTGAAGCTGATCCGGATCTTCATTCAGATGACG
ACAGCGGAAGTTCGTCATGTCACCGGAAAGTTCATACATCGCCGGCGATGGATGCAGACG
CCGGAGACGAGGCAGCAGCTATTGTTGACTCATACTCATCAAAAATGAGAACGCCGGCTA
AGATCCAGAGAACAGATCGTCTCACGGCTCCTAGATGCACGTCGGTAATAGAGTTTATCA
GGAGAAATAATCGGCAGAGGATGAGCTCCGGTGCGGCGATCGCCGAGCTTTGTAGACTCA
ATAATGACTCAAGGACCATAGATCTGGAAAGCTCAGAGACATCGTAGCCGTCTGAATGAC
CATTCGTTTCAATCAACATTACGTGGATTCTACTTTACTTACCCTTTACCCCCAAAATCT
TTTAGTCGGTTGATATAATTTAGGATAAGAGTTGTTGAATTTGTTCTAGTACTACTAATC
TTCTTAGGGATAGGACCATTTGCTAGTATTTTATTTTACTGTATGATGTACTAATATGTT
TAGGATTAATATTAAGATGAGAAATGCCTTAAAAACACA
