Microarray Probes on PGSC0003DMT400064953
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23440_PI426222305 |
JHI_St_60k_v1 |
CGATAGAGGGGTATAAAGTCACCCACCCATTTTTTGTAGAATCATATCTTAAATTTCTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064953
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064953 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G43900.1 |
+2 |
0.0 |
1458 |
732/1131 (65%) |
Endonuclease/exonuclease/phosphatase family protein | chr2:18178801-18183823 REVERSE LENGTH=1316 |
Transcript Sequence (3917 bp)
>PGSC0003DMT400064953 3917 pgsc_dm_v3.4
CCGCCTAATTCCCTCCTCAATTCCCTCTTCTTTTTCATGCATGTCCACTTTCTTCTCTCT
TCACTCATATTTTCCCATTTTGTTTCAATATTACTTTTTCTTTCTCTTTTACGTCCAAAT
CCTGAATCCGTCTCTCCAATTTTCAAATTTATTTGAACATACCATGGACGTCGTTGAGAA
ATTTGAAGACGACGAGAAAAATGCATTAGAAGGTCTAACCGAAGCTCCACCACCACGACG
AAAAGCACATTCGTACAGCCATCAACTTCGTACAAATACAGGTACCCATCATAAACGGCA
TCACCAAGTCCGTAACCACAGCCTCGATGTTGATTATATGCCTAACAGCATTAATAACTC
CGGCCTATACGAAGATTCCTCTGATGATGATAATGAAGGTTTCTATCCTTATTCGACTAA
TTCAAATGAAATTAGTTGTAGTAGTAGTAGTAATAATAGTAGTACTACCACCACGACCAC
TGCTTGTGCTGCTGCTGTTTCGGCTGATAGACAGGATTTTCATTTGATGACTCAGAATTT
TAGTGGACTTGGTGTGATTCCTGATTGTTTGGATGATGATCAGCAACTTCCGTTGCCGGA
ATTTGCTGCATCTGGTGGTGGAGTTGGAATGTTTAAACTACCAACTCGTGCTGCTGTGCA
TCCGTCTCGTCCATCGTGCCACGAGTTGAGACCTCATCCCCTTAGAGAAACTCAGGTTGG
GAGATTTTTGAGGACTATTGCCTGCACAGACACACAACTATGGGCAGGACAAGAATGTGG
TGTAAGAGTATGGAATTTCTCGGATCAATATGAAGCAGGATTAGGATTTAATGGAAGAGC
AAAAAGAGGCGATGAGGATGCTGCACCATTTTACGAGTCAGTAAATACATCGCCTGCTAT
ATGCTTGATAGTTGATAGTGGGAATAAGTTGGTATGGAGTGGGCATAAGGATGGAAAGAT
TAGATCTTGGAGGATGGACCAACCTAATTCTGATGATTCTCCTTTTAAGGAAGGCCTCTC
TTGGCAGGCTCATCGCGGTTCAGTTCTTTCGATGGTCATATCTTCTTATGGTGATATATG
GTCTGGGTCTGAGGGTGGAGTCATAAAGGTCTGGCCATGGGAATCTGTTGAGAAGTCCCT
CTCTTTATCACCAGAGGAAAAACATATGGCTGCTTTACTCGTAGAAAGGTCAGCGATTGA
CCTTAGGACCCTAGTCACAGTAAATGGTGTGTGTAACATCTCATCTTCTGAGGTGAAGTG
TCTGTTATCTGATCATGTACGGGCGAAAGTGTGGGCAGCTGGTTCTTTATCCTTCTCATT
ATGGGATGCACGGAATAGGGAACTCTTGAAAGTGTACAATGTAGAAGGTCAGATTGAGAA
TCGGGTTGATATATCATCAGTGCAAGACCAATCAACGGAAGACGATCTAAACGTTAAGTT
TGTTTCTAAATCCAAAAAGGAAAAGTCACAGGGAAGTAGTTTTTTGCAGCGGTCACGTAA
TGCTATAATGGGAGCTGCAGATGCTGTTCGTCGAGTTGCAACAAAGGGGGCATTTGTAGA
AGATAGTAAGAAAACAGAAGTTCTTGTGCTTGCAGCTGATGGAATGATTTGGAGTGGATG
TTCAAGTGGTTTACTTGTCCAGTGGGATGGGAATGGCAACCGTTTGCAAGATTTTCATCA
CCACCGTTGTGCAGTTCTGTGCTTATGTGCTCATGGTTCTCGAATATGGGTTGGCTACGT
AAGTGGTATGGTACAGGCACTGGACCTTGATGGGAATTTACTAGCTGGTTGGGTTGCACA
TAATGGGCCTGTAATAAAAATGGCAGTTGGGAATGACTATGTTTATAGCTTGGCAAACCA
TGGTGGTATACGTGGATGGAACCTTACGTCTCCAGGGCCTATTGACAACATTTTACGACC
ACAATTAGCTGAGAAAGAAAATCTATACACTAGTCAAGAAAATGTCAGGGTTTTAATTGG
AACCTGGAATGTCGGTCAAGGAAGGGCCTCCCAGGAAGCACTTGCAACATGGCTCGGTTC
TGCAGTTTCAGATGTCGGGATTATTGTAGTTGGGTTGCAAGAAGTAGAAATGGGAGCAGG
TTTTCTTGCTATGTCTGCTGCGAAAGAAACTGTAGGACTGGAAGGAAGTTCTGTTGGACA
ATGGTGGCAGGATGCGATAGGGAAGGCACTGAACGAAGGATCAGCTTTTGAACGAGTAGG
ATCAAGACAACTAGCTGCCTTGCTTATTGCTATATGGGTGAGAAAATCTATAAGGAATCA
TGTGGGGGACCTAGATGTTGGAGCAGTTGCGTGTGGAATAGGGCGTGCAATTGGTAATAA
GGGTGGAGTTGGTCTGAGGTTAAGAGTCTTTGATCGAATAATGTGCTTTACAAACTGTCA
TTTTGCCGCACATTTAGAAGCAGTCAACCGTCGCAATGCTGATTTTAACCATATATTTAG
AACAATGGTTTTCACCAAATCCTCCAGCCTTCTAAATAATTCTGTTGCTGGTGTTTCATC
TTCTGCTCAGATGCTTCGCGGTGCAAATACTGCACAAATTAATCCAGACGAAGGAAGACC
CGAGCTTGGTGAAGCTGACTTGGTCATATTCACTGGTGATTTCAACTATCGTCTTTTTGG
AATATCGTATGATGAAGCAAGGGACTTTGTGTCACAAAGATGCTTTGATTGGCTTCGAGA
AAAAGATCAACTGAGAGCAGAAATGATAAGTGGTAAGGTTTTCCAAGGGATGAGGGAAGC
AATCATCAGATTTCCTCCAACTTACAAGTTTGAAAGGGGAAAACCAGGATTAGGAGGATA
TGATTCGGGGGAGAAGAAACGAATTCCAGCTTGGTGTGACCGAGTACTATATAGAGACAA
CAGGGCAACTCCTTCAGTAGAATGCAGTTTACAATGTCCTGTAGTTGCTTCCATTATACA
GTATGAGGCTTGCATGGAAGTGACAGAAAGTGATCATAAACCAGTAAGGTGCAAGTTTCA
TGTTGAAATTGCTCATGTTGATAGATCAGTTAGGAGACAAATGTTTGGTGATATTTTCCA
GAACAATGAAAAAGTCAAGTCTTTACTACAAGAATTTCGTTATATTCCGGAAACTCTAGT
TAGCACTAGCCAGATAGTTCTTCAGAATCAAGACACATACAACTTAAGAATCAGCAGCAG
AAGCAGAGAAGACAAACTTTTTTTCCAGATAACTTGTGGAGGTCAATCCACCATCAAAGA
GGATGAGCAAGCATCAGAGTATCATCCGAGAGCGTCTTTTGGTTTTCCCCGGTGGCTTGA
GGTAACACCTGCTTCTGGCATCATCAAACCAGATCAAGCTGCTGAAATCTTGGTACGTCA
CGAAGAGTTCAATAAGTTAGAAGAAACTGTTGATGGAATACCACAAAGCTGGTGGTGTGA
GGATACCAGAGATAAGGAGGTGATTTTGCTGATCAATGTGACAGCCAGTCGCTCGACAGA
GGCAAGAACACATAAGGTGAATGTTCGACACAGCTTCTCAGCTAATGCAGTTCGGACAAC
TTCAAAAAGCAGTTCAAGAAGAAGCCAAGGTGGTAGCTCTCACCATAGATCTGCACTTCG
ACATGTGGGAAGTGGCTCTGAATCAATGACAGACCATCAAAGCCTTCGGGGTCCTTGATA
GCTAGCATGACAAACAAAAAGTTTGATTTCCAAGACAATGCTCAGATGTTTAACTCTTGA
GATTTCTTTGCTAGCATTACTACTTGATAGGATCTTGATGTAAATACTCATAGACAAATT
TAGTATGGAGCTGAGCCTCCACCTCAAAAATCTCGATAGAGGGGTATAAAGTCACCCACC
CATTTTTTGTAGAATCATATCTTAAATTTCTGTATTGATATGCTACTTTTTAACTGAAAA
CTCTAAGATCAATTTTG
