Microarray Probes on PGSC0003DMT400064924
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23451_PI426222305 |
JHI_St_60k_v1 |
GCTTGGTAGCAAGAAGGTGTAGATGGCTGATATACAAAACAAACTTCTAAATGAAAATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064924
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064924 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G31820.1 |
+2 |
0.0 |
652 |
387/568 (68%) |
Ankyrin repeat family protein | chr2:13530350-13532562 FORWARD LENGTH=662 |
Transcript Sequence (2566 bp)
>PGSC0003DMT400064924 2566 pgsc_dm_v3.4
TTTCTTGATTTTTTGGCTTTTTTCAAGAACCCAATAAAGTAGCAGCTACCCACTGCCTTG
ATGACCAGAAAATCCACAATATCTCTTGATTTCAGCTTATGGGTTTCGTCCACAATCAGG
TTTTGAGCAATATACTTTGTGAAAGCTTGAATTTTTTAGTCTGAATTTGAGTTCTTGATT
TTGCTTGAAGCTTCCTTTTGCTTTAAAATTTTGTGGGTCTGTAGAATTTCCATGTTTTCA
AGTGTTTTGAACTTAGAAATGAGCCAAAGATGTGATCTTTTTGCTTAAACTTAGAGAAAA
TCTTCAAGATTTTTGTAACAATTTGAAAGTGGAAACAAGTGTTATGGAAAAAGAAGTTAG
TTTTCAAAGTGAAAAAATGGAAAAACAGCAAAATGGGGTTATGGAGAAGCAGAAAAGTTT
TAGGATAGTAATGGAGAGGCAAGTTAGTTTTAGTATTGAGAAGAAAAGGGATAAGGAATC
ACCAGGGAAAAGAGGGGATGCCCCTCTTCATCTTGCAGCTAGAGCAGGGAATTTAGGAAA
GGTGAAAGAAATTATTCAAAAGTTTGATAATAGCAAAGGGGTTAAGGAGTTGTTGTCCTT
GCAAAACCAGCAAGGTGAGACTGCATTATATATTGCTGCAGAAAATGGACATACTTTGGT
TGTTGTAGAGATTTTGAAACATTTGGACCTTCAAGTTGCTTCTCTTGTAGCAAATAATGG
ATATGATGCATTCCATGTTGCAGCAAAGCAAGGTCATCTTGAAGTACTGAAGGAACTGTT
ACATTCGTTTCCAAACCTGGTTATGGCTACAGATTCATCCAATTCTACAGCGTTACATAC
AGCAGCTGCCCAGGGTCATGTTGATGTCGTAAATCTGCTTCTGGAGATTGATTCGAACCT
TGCTAAGATAGCTCGGAACAATGGGAAAACTGTGCTCCATACAGCAGCAAGAATGGGACA
CTTGGAAATAGTTAAGTCCCTTCTGAGCAAAGATCCTGAGATTGGCTTTAGAACAGATAG
TAAAGGCCAAAGTGCCTTGCACATGGCTGTAAAAGGACAAAATGTTGGCATTGTGCTCGA
GTTAATAAAACCGAATCCTTCTGTATTGGCATTGGAAGATAACAAAGCAAATAGAGCTCT
TCATATTGCAACAAAAAAGGGACGGCCACAGATGGTACAATGTCTGATATCAATTGAATG
CATCGATCTGAATGCCATTAATAAGGCTGGAGAAACAGCTCTTGATATTGCAGAAAAGTT
TGGAATGCCAGAGGTTGTTTCCATTCTGAAGGTGGCTGGAGCTGCCCATTCCAAAGACCA
TGGGAAGCCCCCAAATAATACTAAGCAACTCAAGCAGACTGTCAGTGATATAAGACACGA
TGTGCAGTCCCAACTTCAACAGAGTCGTCAGACAGGCTTCAAAGTACGGAAAATTGCTAA
GAAGGTGAAGAAGCTCCACATTAGTGGTCTCAACAATGCCATTAACAATGCCACAGTTGT
TGCTGTCCTTATTGCTACTGTAGCTTTCGCTGCCATCTTTACTGTGCCTGGTCAGTATGT
TGAACAGAAAAAAGATGGTTTTTCGCTTGGTGAAGCAAATGTAGCCGATAAAGCAGCTTT
CATAATCTTCTTCTTGTTTGACAGTATGGCCTTGTTTATTTCCATTGCTGTTGTTGTTGT
CCAGACTTCTCTGGTTGTGATTGAACCGAGAGCAAAGAAGCTACTCGTATTTTGGATAAA
CAGGCTCATGTGGGCAGCTTGTCTCTTCATCTCAGTGTCCTTTATTTCTCTTGCTTATGT
GGTGGTTGGATCGAAAGAAAGATGGCTTGCTATCTTTGCAACTGTGATTGGTAGCACCAT
AATGATCACTACTATTGGCTCCATGTGCTACTGTGTGGTTCGACATAGGCTAGAAGAGTC
AAAGATGAGGAATATAAGAAGGGCAGGGACTCATTCACATTCATACGCTATGTCTGTGGC
ATCAGATACAGAGCTCTATGGTGAAAGCTACAAGAGGATGTATGCAGTCTAGGAACAAAC
AGAAAACTTTTTGCCTATGGTATCAAATCTCAAGCTCCATGGATGTAAAGGACAAGTTAA
TATATGCAGTTCTAAACCATAAAGTTTGGTGAACGTCTCTTCATAGCACGAGGTTCCAAA
TGGTCTAGCATACGAAGGTTATGCTAGTTAGGAACTAAAGAGAATGCTTCCACTAGTATA
TGCAATAATACCGCAGTCATATGGCAATTCTCTGATATGGTGTTCTTGCAACACTAGAAT
TTGCAACCTGAGGCAAGTCTTGCTTAGAAGTTCGAGATTGAGGCTCTAACAAATCATTCA
GTTTGGTTTCCACAACATTTAGTAGTTCAAGAGCAAGTTATGTGGGAGTTTCCTACTATA
TGGCTACAAAAAATAGCAAAACAAGAGAGCAGCTTGGTAGCAAGAAGGTGTAGATGGCTG
ATATACAAAACAAACTTCTAAATGAAAATGTACAAACAAAAAAGTTATTTTTTTTTGTGA
TATAATTCATTGTAGTTCTTCTCTTTATAAAATACAGCTTTTTTGC
