Microarray Probes on PGSC0003DMT400064750
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43565_PI426222305 |
JHI_St_60k_v1 |
GTTTATATTGGAGAAGCTTTTGAGCTTCCATGTAATGTAGCACTTGAACCAAGTAATAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400064750
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400064750 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G29180.1 |
+1 |
1e-159 |
481 |
265/478 (55%) |
Protein of unknown function (DUF1336) | chr3:11149073-11151322 FORWARD LENGTH=513 |
Transcript Sequence (2754 bp)
>PGSC0003DMT400064750 2754 pgsc_dm_v3.4
ATAAACAAACACTCGCACGCACTCTCAGACTTACGTCAAATTACCTTCTTATCCCTCTTC
TTCTTCCTCTCAATTCTCTCTGTCAAATCCTATACATAAAAATAGAAAAAATAAATATCC
AGAAAACAAATCCCAAATATAGAAACAACTGCTTCAAAAAGATTGTTTTTAAAGAGCTTG
GATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTCCTCCTCCTCCTCCTCTCTC
TCTCTGTTTCTTGAAAATTTTCATTTTTTTTTCACAGAGAGGGAGACTTACATTCATTCA
TTATTATTGTTAATGGTGTTTTCTTCATTCAAAAAACAAAAAGGTATACTTAATTTCGTG
AGTTCCAATAGGAATTTGCATCTTTGCATGGTACATCAGCAATTAGCAGACGGATTTGTG
AGCTGAGTCGTAGTAATGGGTGGTTGTGTATCAACTCCAGCAACCACAATCAGGGCAAGG
AAGAAACACCATCGTCACCACAGAAAATACAATAGAAAGAATTCAAACTCAGGTATAATA
GGAACCAGGAAAAGAAACAGCGATGCACGGGTGACAGACATTGCTGTTAGTGAGTTTGTT
CATACAACTACAACAACCTGCAGAACATCTGAGGTCTCCAATTCCACATTTCATCTTACT
CAGTTGCAGTGGCAGCATAATCAAATAGATGGCAACGTTCTTTGCCAAGAAGAAGCATGG
TTTGACTCGCACAGCATTTTTGAGTCCGACTCAGATGATGACTTTAGTAGTGTTCATGGA
GATATTTTCCCCAACATTTCAAATGGACAAGTAGTTCAGTATGAAACTTCATCATGCTTT
ATGGATAGTAAACACAAGTACAAAGAATACCATGAGAAATATCTCAAGATAGATGGCTTG
AGCAAAGATGGAGTTGAGGATCCAAATGGACCTGCAGTTGTAATTGCTCAGGACTATGAA
CATCCATCCATGGGGAAGGGTGAAGATTTTGGTACCAAAAAGAAGAAGAACTTGGATCGT
GCGTATGCAAGCTTTAAAAGTGTAAAAAAGGAGATACTTCAGATGCAGGAGAAAACTCAG
GAAACTGTTTTCAAGTCTGTTTTACCGAAGCTGGTAAATACCTTGAGTTTCAATGACAAA
ATCATAAATGGACCAAACTCAGCTCCACATTCTCAAGTAAAGAAGTCAACTATTATAAGA
CTTTCTATGAAGAGGACATCTGTTGATGGGGAAGAAAATGAATTTTGTTCTTCGAGAAAG
TTTCTACACCGCCCCAGGGCTGGGCTTTTAATTCCCTGTTGCACAGAAGAAAAGTCTATC
GCAGGAAGTTGGTCAAAGATTGAGCCTTCAAACTTTAAGCTCCGTGGTGATAGTTATTTC
AAAGATAAGAGGAAAGCCCCTGCTACTAATGTGTCTCCTTATACTCCAATTGGGGTCGAC
TTATTTGCTTGCCCAAGAAAGATCAATCATATAGCACAACATATTGAGCTTCCTTCTATA
AAAGGAGATGGAAGAATACCGCCTTTACTAATTGTTAACATTCAGCTGCCCACTTATCCT
GCTCCGATGTTTGTTGGTGATGCTGATGGAGAAGGCTTGAGCCTTGTAGTATATTTCAAA
CTTTCTGAAACTTTTGAGGAGGGCATCTCTCCCCAGTTTCAGGACACCATCAAGAGATTC
ATCGAGGATGACATGGAAAAGGTGAAAGGTTTTGCAAAAGAATCAACTGTTCCTTTCAGA
GAGAGGTTGAAGATTATGGTTGGGTTGGTTAATCCAGATGAGATTGTTACAAGTTCAACT
GAAAGGAAGCTTTTGAATGCTTACAATGAAAAGCCTGTGCTTTCCCGCCCTCAACACAAT
TTTTATCAGGTGGATCTTTGATACCCTGACTTTAGTTTGTTTGTCAGTTTAGCAACATTG
TGGCTGTTGTTCGAACACCACAATATTCTCAATGTGCATGGTCTCTGCTTATTATAGGGC
CCGAATTACCTAGAAGTTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAAGGGA
CTTGATGCTTTTAGAGAACGTTTACGACATGGAATACTTGATTTTGGTCTAACAATTCAG
GCACAGAAGCCAGAGGAGCTGCCAGAGAAAGTGCTTGGTTGTGTTAGATTGAACAAGATT
GATTTTGTTGATCATGGCCAAATACCCACCCTTGTGAGAGTTGAGGAAGATTCATGTTCA
GAATAATACATCTAATACCTACAGCTACATGTTACATAGGGGAGTAGATGTTAGTGTATC
TTGAGCTCTGTATATAGCTCAATTGTTGTTAAGAAAAACAACACCTCACTTTTAGTATTA
AATTTGCACGAATTGTTATTAACTCACTAAGTTATAGTGGACGCTCGTGGTACTCCGAAC
CCATTGACTTAGCATACTTGATCTACTTCAACCATTTGCGTTGGATAAGACACTAAGGGG
AGTAAACCGCTCCTAACTCAAAGGTTTTCCATTCCTGAAGTGCTAGCTTGACATTTCTAG
TTAGAGGTGAAGGAATCTCAACTATTCCGCCACACACCTTGATGTGATAAGAGTCAAAAT
ATTTGGTGGAGAAGGATAACTTATTTGTGATCATGAGATTATTTCTGAATTAGAGCATTA
TGCTTGTGTAATTGATCTTTTAGGTTGTAATGGTTTATATTGGAGAAGCTTTTGAGCTTC
CATGTAATGTAGCACTTGAACCAAGTAATAACATTTAATTTGGTATTCTTTTTT
