Microarray Probes on PGSC0003DMT400063777
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12318_PI426222305 |
JHI_St_60k_v1 |
GCCCCATTGTACATTTTCTGTCATTACACTTCGTGGTATATAAACATATAGCTGTACATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063777
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063777 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G18750.1 |
+1 |
1e-79 |
273 |
158/361 (44%) |
Calmodulin-binding protein | chr2:8125827-8128363 FORWARD LENGTH=622 |
Transcript Sequence (2794 bp)
>PGSC0003DMT400063777 2794 pgsc_dm_v3.4
CGGCAGTTCCACAAAGTTTGGGTTGATTAGATCCTCTATATTCTTGTAACTAAACTTTCC
TCGTATTTTTCTAAGTTCACGCGGTAGGTAATTCATCGTTGCCTACTAATTCTGGTTATT
TTCTTGGATTTTTCTTCTTCAAATCTTGAAAGCCCCCATTTTTCCAAGTTGTGGATTTGA
TTAATCAGTAAAAGCAACAATATTTTATTCAAGATTCTCTTCTTTTAATGCAGAAGACGA
CATTGACTTAAACAAGTAAGTCTTTCAGTTTGAATTTTGAATAATAAACACAACCACACA
TAGCACCCACAATGTGTTTGTGTTAATGTCTAAGAGAACTACACACCCTTTGTGTTTGAC
AATATAAATTAATTGGATATATATGAAGCTTCTTACCTGTTTCCTGCTAATTTTGGGGTC
ATTATTTCTAATATAAGACTATAGTTGTTAGCAGTTGAACGTTACCTTCTAACATATTGT
GCAGGACTATTGGTATCACTCCCAAATTGGACTTTGATGGTACAGAAACGGAATATCAAT
CAGGATAATGATGAAAACTCTGAGTTTCCATCTAGGGAATCTAAGCGCCAACATCCTTCT
AATGCGTTTTTTTCAGGGTTAAGGAGTTACTCTTCTCCACAAGAACTTGCACTAAGGTTG
GAGCCCTCAATCCGAAGCTGGGTGCGTGAAGAGATTGAGAGAACACTTCAATCTACCCTG
AGATCCTCACTTAATGATGACAAGACTTCTCAATCTAGGGCTATTCAGTTACTTTTTGAC
GATATTCTCCCTTCTTCCCTTTTCACGGGCAGTAATGTATCCAGGGACAATAGGCCCATT
AAAGTTCTCTTGCATGATGCTAGTTCGAACCAGAGAATAACATCTGGACCGTTATCTTCG
GCAAAAGTTGATGTGGTTGTTCTTAATGGGGAATTTAACCCCAACGATCTAGAAGACTGG
AGTGAGGAAGAGTTCAGCAAAAAGGTTATTCGTGCAAGAGAAGGAAAACGTCCATTATTA
ACTGGAGATTTAATCATTCAGCTAAGGGATGGTGTGGGATATCTGGGTGATATCAGCTTC
ACTGACAATTCAAGCTGGGTAAAGAGCAGGACCTTTAGGTTGGGACTGAAATTGATTAAC
CGCTCTGGTGAATTTAGGGTCAGAGAAGGAGTTAGCAAGCCTTTTACTGTGAGAGATCAT
CGTGGGGAGGCTTATAAGAAGCATTACCCTCCCACTTTGGATGATGAGATCTGGCGGTTG
GAAAAGATTGCCAAAGATGGTGCTTCACACAAACGGTTGAGTAATGAAGGAATATCATGT
GTGAAAGAGTTCCTACGGCTGTTTGTCACTGACCCATCTCTTTTACGTAAGATGCTGGCT
TGTGGGAACAACATATGGGAGAAAATAACTGAACATGTGAGCACTTGTCCGTTAGACAAC
AGCGAGTGGTACATCTACAACGCCGGAGAAAGTATTGTACTTCTGTTCAACTGCATCTAT
GAACTTGTAGGTGCAATTCTTGATGGACAAAATTTCCAGTCCATTGACAAATTAGATGTA
TTTCAGAAGGTCTGTACTCTGTATCCCACATAGATATTTATTTGTTTCCTTACTGTAAGA
GTTAAGAAGCTGATGATATTCTTATAACTGCCAGCGGATGGTGGAAGACTTTAAGCGTAG
TGTTTATAAAAATTTGAATTGTCTAGCTCCCCTTGAGGACCGTTCTTTGATTGGCCAAGC
AGCCCTTACATCCAATCTGCAAAATGGCCTTTCTCATATTCCTAGTTCAAGCCAACAGAA
TATGAACTACTCAGATGAGCAAGGTCAAGTGGAGTTCCAGAGCAACTCTGATCATGCCAC
AATTTCATCACCGCTAGCCTACACAGCTCAACAGGATAGTCCAACTGCAGTGTCCATGCC
TGAAAGCTTTCATGGAATGCAAGCATTTAATTCGACCTTGGCAAACAGTTTCTTGGTTGG
TGATCCCTGCTCCAGTATCTACCCTGGTGATTATGATTGGGGTTCCAATGGTTCATTTGA
TTCACTAGGGATGAGCGATTATCTACCTCCCAACAACAATTATCAGTTTGAGACACCAGT
GTGGCAAGGGAATGGATTGTTAGCGAGTTCAAGTGTTCAGCCGGTGTCACCTAATATTGG
CATTCACATCACAAGACGTGGAAATCCTAGAGCCATTTGGTGCACAATCCGTGCTGTCCT
GAAATGGAAAACATTGGTTAAGCGAAAGTAGCTATTTGAAGGTGGAAAGGCTTTTACAAG
TAGATATCTGAAGTTTGTTCGAGATATAACCAGGAAACTTCACCTCCATCTCTCAGCCTA
TTCTTTGAACTCTTGGGTATTTTGAAACATAAATATATTTATATGTCCATTACATATAGC
ATCCATCGTATATATGTGAGTAAATTGTACATATAGTAAGGTTTTTGTCAGGATGAAGGT
GCATGTAGGATAAATTTTCTTGCAGAAACAGTAGCAAGATATCAAATGTTATGCTACCGC
AAATGCCATCGTCCTTGGAGGAGTTTAGTGCTACCTCTTTACTAATAGTACTAGTAGTTT
TCTTGTGTGTTTTCTGCATCAGATGTAATAAATGGTGCTTGTACAGGAAGTAATATTATT
ACCTTAATTATTAGTTTATAATAATGAGATGCTATGTCAATTGTTGTCAGCTGTATCCTT
GGAGCTCGTCTGGCCCCATTGTACATTTTCTGTCATTACACTTCGTGGTATATAAACATA
TAGCTGTACATTACCTAATTGTTGGGAATCTTAG
