Microarray Probes on PGSC0003DMT400061440
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13949_PI426222305 |
JHI_St_60k_v1 |
CACCCCTTTTCAAGGGATGTGATATGTAAAATTTTATGCTCTACTGAAAATTTTAGCACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400061440
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400061440 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G07710.1 |
+3 |
1e-156 |
462 |
268/430 (62%) |
Ankyrin repeat family protein | chr1:2386275-2387986 REVERSE LENGTH=543 |
Transcript Sequence (1651 bp)
>PGSC0003DMT400061440 1651 pgsc_dm_v3.4
CTTTTACTAAAATGTTACGATTTTTCGTTGCAGAAATGGTGAAGGTACTATTGGAGGCAT
TTCCTCAGCTGTCAGTTACATTTGATCAGTCAAATTCCACAGCATTGCACACTGCATCTG
CACAAGGTCACATTGATGTTGTCAATTTCCTTTTGGAAACTAATAGCAGTTTAGCCACAA
TACAGAAGAATAATGGGAAGACGGCGCTTCATTCTTCAGCAAGAAATGGTCATGTTGCAG
TTGTGAAGGCACTTTTAAGCAAAGAAGAAGGGATCTTAAATTGGAGAGATAAAAAGGGAC
AAACAGCTCTTCATATGGCAGTCAAAGGCCAAAGTGTTGATGTGGTTAACGAGCTTATTC
TATCGGATCCTACTTTGGCTACAATTATTGATGGAAAGGGTAATACTTCTCTGCATATTG
CAACGCGTAAAGGCCGTGTAGAGATCGTTCAAGCACTCGTAAAGGACAAACGAATGAAGT
GGGATGCCATCAATAAATCTGGTGAAACTGCTCTTGACGTTGCTGAGAAAGCACGGAATT
CAGAGATAGCAGCGATTCTAAAGGAACATGGTGTCCTGACTGCAAAGAACATGAAGCTAG
CTTTACCAACGCGTTCAGCCAAAGAACTGAAACAAACTGTTAGTGACATAAAACATGACG
TTCACAATCAGTTAGAGCACACTTTCCAAACTCAGAAAAGAGTGAAGAACATAGCAAAAC
GTCTGAACAAAATGCACACAGAAGGTATCAACAACGCCATAAACTCCACCACGGTTGTTG
CTGTTCTTATAGCCACTGTTACTTTTGCTGCCATATTTAATCTACCAGGCCAATATACCG
ATAATCCTAAGGAGGTTCCTCCGGGATACTCAATAGGAGAAGGAAGGATTGCTCCTCAAC
CCCCTTTTGTCATTTTCTTCATATTCGACTCTCTTGCACTCTTTATATCATTAGCTGTTG
TGGTTGTTCAAACATCAATCGTGGTTGTTGAAAGACGAGCCAAAAAGCAAATGATGGCGA
TTATCAACAAGCTAATGTGGTTGGCTTGTGTATTTGTCTCCGTAGCATTTCTTGCACTGT
CATATATCGTTATAGGTAAAGATGAAAGATGGATGGCAAGTGCAGTAACTTTTATGGGAA
CTTTTATCATGGTCGCGACACTAGGGACACTGTGTTACTGGGTAGTTATGCATCGGATTG
AGTCTTCGAATTTGAGAAGTCAGAGGAAATCAGCTCGGAGTAGCAAGTCGTTGTCACGGT
CCGTATCAATCATGTCAGAATCAGAGATCCCTGAAGATCAGTATAAGAAACTATATGCTA
TATAGTTCTAGTTGTTAGCCAATGTACATTCTTGTGTAGTAAAAAATTGATCTTTGCACT
TCAAGATTCAATGCAATAGCTCTAGTTTTTGTGTAGTATATGAGCAAGATAATTGAAGTG
TAAGATTTTAGAATTATGAACATTTTACTAAGTGAAATTCAGTGCAGTGAGCAAGCTAAA
GTAAATAACAATCTGGTGCACAAAATATCCTGCGTTAGCAGGATCCGGGGGAGAGCCACA
CCCCTTTTCAAGGGATGTGATATGTAAAATTTTATGCTCTACTGAAAATTTTAGCACCTT
TCTGATGTGTACAGATAATTGGTTTTTTTTC
