Microarray Probes on PGSC0003DMT400060940
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22893_PI426222305 |
JHI_St_60k_v1 |
GCAGCACATCGGTGACAAATCAAAGAGAAAGTTGTAAGGTTTTAAGCATAGTAGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060940
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060940 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G15670.1 |
+3 |
3e-66 |
219 |
128/363 (35%) |
Galactose oxidase/kelch repeat superfamily protein | chr1:5390119-5391198 FORWARD LENGTH=359 |
Transcript Sequence (1328 bp)
>PGSC0003DMT400060940 1328 pgsc_dm_v3.4
CTTCATCTTCTTCAATTAGAACAAAAATTTCAAAAAATAACAAAATGAATCAAAATGAGT
TCACTGAATTAGTACCGGGTCTTCCCGAGGACATTGCCCTCGAGTGTTTGACCCGGTTAC
ACTACTCAACTCATGGAGTTGCATCTCGTGTTTGCCGAAGATGGTGTAGAATTCTTCAAA
GCAAAGCTTTCTATTACCATCGGAAACAAACGGGTTTTACCCATAAAGCTGCTTGTTTAG
TACAAGCTTTACCTTCTCCGGTTGAATCCAAACCCACTGGACAACCCAGGTACGCGATCT
CAGTTTTCGATTTAGTATCCGGGATTTGGGATCGGGTTGACCCGATTCCTAAATACCCTG
ATGGGTTACCGATGTTTTGTCAAATTGCAACTACTGAAGGAAAGCTAATTGTTATGGGTG
GATGGAATCCGGCGAGCTGGAATCCAATTAAGGACGTGTTTGTTTACGATTTCATGACTC
GGAGATGGAATCAGTGTAAGGATATGCCGGAAGCTCGGTCGTTTTTCGCTATGGGAGCTG
CCGGAGGAAAGGTTTTCATCGCCGGCGGTCACGATGAGAGTAAGAACGCGCTGAGTTCTG
CTTGGGTTTTTGATATTTCATCCAACGAGTGGACGGAGTTGCCTAGGATGAGTGAGGAGC
GAGATGAGTGTGAAGGGGTTATAATCGGCTCGGATTTCTGTGTCGTAAGTGGTTACGACA
CGGAAACCCAAGGCCGATTTAAAAGTAGTGCTGAGTTATATGAACTCAGCACGGGTCAGT
GGAGACGAGTTGAGGATGCATGGAGGTCGAGTCAGTGTCCTAGGGCATGTGTAGGGGTGG
GAAAAAATGGAAATTTAACTTGTTGGGCAGAATCCGACCCGAATGTTAAAGTCGGAGCAT
GTGGTGTGGATCTTGGTGATCGGACCTTGGTAACCGGGTCGGCCTATCAAGGTGCCCCAC
ATGGGTTCTTTTTCGTAGAAAACAACAAAAAAGGACAAAACAGTAAATTGACAAAGATAA
ATGTTCCTGATGAATTTTCAGGATTTGTACAATCTGGATGCTGTGTGGAGATCTGAAATG
AAATCTCGAGTTCGAGTTCGTGAAAATGAAAAAATTATGTTCAGAGTGTCATCCTCGCTT
TTAATGTGCGAATTCAAAATTAATCGAGCCGGATGCAGCACATCGGTGACAAATCAAAGA
GAAAGTTGTAAGGTTTTAAGCATAGTAGTTTTTTTTAATGTAAAACTATGTTTGGAGTAT
ATAGTAAAATATAGAGGCAATATTAATAGGTTACTAGTACAAATTTTCTTTTTGTATGTT
ACTCTTTG
