Microarray Probes on PGSC0003DMT400060396
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14242_PI426222305 |
JHI_St_60k_v1 |
GGCGGGTTGTGTTACATTTGTATGGATTAAAATCGGCGTTCAACTTAAAATCTCTTCTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060396
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060396 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36380.1 |
+3 |
0.0 |
1969 |
1017/1454 (70%) |
pleiotropic drug resistance 6 | chr2:15257583-15263627 FORWARD LENGTH=1453 |
Transcript Sequence (5009 bp)
>PGSC0003DMT400060396 5009 pgsc_dm_v3.4
TAAATTGAGTTTTTTTTCTCAATATAATGAGACTATCCAACTTTTTTTTTTTTGTTTTCT
TCTTGTTTTAGAGACTATCCATGATCTTTTGTGTATATCAAGTTGTAATGTACGGTAAGA
CTGCGTACAATATACTATAGTGATTCCGGAGCAGAAGCTTAGTGCATCAGACTGTTGTCT
TTTGTGGGTATCAAGTTGCTGAACAAATCTTGAATTGGAAGCAGGGGATTACAAAGGTGA
TTCCAAAGGTGTAAATTTGAGTTTTACATAAAAGGGTGAAAATGTCAGCAACTATAAGCA
AAGATGAATTGAACAAGTCTCTAAGCCGACGATCGATGAGTAGGAGCAGGAGAATGAGTT
TTGGATCAACAAGTGTAAGAAGCTGGGCTTCAGCAAGTGTTACAGAAGTTTTAACTGCAC
CAGGAGGTGATGTTTTCCAGAGAAATGGGAGGGAAAACGACGATGAAGACGAGCTAAAAT
GGGCTGCAATAGAGAGACTTCCAACATATGATAGGCTGAGGAAAGGGATTTTAAAGCAAA
CATTGGATGATGGAAAGATTGTTCATCAAGAAGTCGATGTAACGAATCTTGGCTTGCAAG
ATAAAAAGCAGTTGATGGAAAGTATACTTAGGATTGTGGAAGAAGATAATGAGAGGTTTC
TTCTTAGGCTAAGAGATAGGACTGATAGGGTTGGGATTGATATTCCAAAAATTGAAGTTC
GTTACGAGCATCTTTCCATCGAAGGAGATACATATGATGGATCTAGAGCATTACCTACTC
TGTGGAATGCTACCATCAACTTTGTAGAGGGGGCTCTTGAAAAAATCAAGCTTGTCCCTT
CGAAGAAAAGGGCTGTCAAGATACTTCGTGATGTAAGTGGAATTATAAAACCATCAAGGA
TGATACTACTTCTTGGGCCTCCGGGAGGTGGGAAAACTACATTGCTAAAATCACTTGCTG
GAGTGCCAGACAAGGATCTGAGAGTCGCCGGAAAAATCAGTTATTGTGGTCATGAGCTCT
CATATTTTATTCCTCAAAGGACTTGTGCTTATATCAGTCAGCATGACCTTCATCATGGAG
AGATGACAGTCAGAGAGACGTTGGATTTTGCCGGACGTAGTTTAGGAGTTGGAACAAGAT
ATGATCTCCTCACAGAACTGTCAAGACGCGAAAAGGAATTGGGAATCAAACCAGATCCCG
AGATAGATGCATTTATGAAAGCTATAGCAGTTGCAGGCCAAGAATCAAGTCTAGTCACGG
ACTATGTTCTTAAGCTTCTTGGGCTGGATATATGTGCTGATATAATGGTAGGTGATCAGA
TGAGAAGAGGTATATCAGGTGGACAGAAGAAGCGGCTGACGACAGGAGAAATGTTGGTTG
GTCCTGCTAAAGTTTTCTTTATGGATGAAATCTCAACGGGCCTCGACAGTTCTACAACAT
TTCAAATTGTCAAATACATGAGACAGATGGTCCATATAATGGATGTAACTATGATAATAT
CCCTTCTTCAACCTGCACCTGAAACTTTTGAACTTTTCGATGACATTATTTTGCTCTCAG
AAGGACGCATAGTCTACCAAGGTCCACGTGAGAACGTGCTTGAGTTTTTCGAGAGTGTTG
GATTTAAATGTCCAGAAAGGAAAGGAATTGCTGACTTTCTCCAAGAGGTTACTTCTCTAA
AGGACCAAGAACAATATTGGTTCAGAGAAAACCAACCTTACAGATTCATTACAGTGGCTG
AATTCGCAGAACGTTTTAGCAATTTTCGTGTTGGACGTGAACTTCTCGATGAACTAGAAG
TTGCTTATGACAAAAGCAAAGCCCATCCTGCTGCACTTGTCACAGAAAAATATGGTATCT
CCAACATGGAACTCTTCAAGGCATGTTTATCAAGGGAATGGCTATTAATAAAGCGAAATT
CATTCTTATACATGTTCAAGACATTCCAGATTACTGTCATGTCAATAATAACCTTTACGG
TATTCTTTAGGACAGAAATGAAAGTTGGACAGATTGCAGACGGAGGCAAATTTTACGGGG
CATTGTTTTTCAGCCTAATCAATGTGATGTTTAACGGTGCAGCAGAGCTTGCAATGATCA
TTTTCAGACTTCCCGTGTTCTTTAAACAAAGAGATTCTCTATTTTATCCTGCCTGGGCTT
TTGCTCTCCCCATTTGGCTTTTAAGGATCCCCCTCTCCTTCATGGAATCATTGATATGGG
TTGTCCTTACTTATTATACCATTGGTTTTGCTCCTGCTGCAAGTAGGTTTTTCCGTCAAT
TCTTGGTATTTTTCGCTCTGCACCAGATGGCGTTGTCTCTCTTCCGCTTTATTGCTGCAA
TTGGAAGGACTCTAGTAGTTGCAAGCACTATTGGCACTTTCAGTCTACTGATAGTCTTTG
TGCTTGGTGGTTTCATTGTCGCAAAAGATGACCTCGAACCATGGATAAAATGGGGCTACT
ATGCATCTCCAATGTCATATGCACAGAATGCAATAGCGATCAATGAGTTTCTGGACACAA
GATGGAGTACTCATAACAATGACACTAGTTTCTCCGAGGAAACGGTGGGAAAGGTTCTTC
TTAAGTCAAGGAGCATGTATTCAGATGATTATATGTTCTGGATATGTATCATTGCCCTAT
TTGCCTTCTCATTTCTCTTCAACTTATGCTTCATCTTGGCGCTGACTTACTTAAACCCAT
TTGCTGATTCTACATCTGTTAGTATGGATGACGACAAAAGTAAGAAAAATGAGCAAAGAA
ACCGTAGCCCCAAAGAATCAACAGAGAAGAGTTCAGCATCTACCACCGCAACATTTGAAG
GTATAGATATGGCTGTGAGGAACAACTCGAGTATTGACAAAAGAGCATCCAAAAAAAGAG
GAATGGTGCTTCCTTTCCAGCCATTGTCACTTGCATTTAACCATGTCAATTACTATGTCG
ATATGCCAGAAGAAATGAAATCCCAAGGAATTGAAGAGACTCGTCTCCAATTGTTACGAG
ATGTTAGTGGCACTTTCAGACCTGGAGTCCTTACAGCCTTAGTTGGTGTAAGTGGAGCTG
GGAAGACTACTTTGATGGATGTCTTAGCAGGAAGAAAAACTGGTGGCTACACTGACGGAA
GTATCATCATTTCTGGTTATCTGAAAAACCAATCAACTTTTGCTCGGATAAGTGGTTATT
GTGAACAGAATGACATTCATTCTCCACATGTTACTGTTTATGAGTCATTGATATATTCAG
CGTGGTTGCGTCTCTCCCCAGATGTCAAAAAGGAAACTAGGAAGAATTTTGTCGAGGAAG
TAATGGAACTAGTCGAGTTGAATCCTCTCCAGAATTGTCTAGTTGGCCTGCCAGGGGTAG
ATGGTCTCTCAACTGAACAAAGAAAAAGACTGACCATAGCTGTTGAACTGGTAGCAAATC
CATCTATTATTTTTATGGATGAACCTACATCAGGACTTGATGCTAGAGCAGCGGCAATTG
TTATGCGAACTGTGAGAAATACAGTAGATACAGGCCGAACTGTCGTGTGCACTATCCACC
AGCCAAGCATAGATATATTTGAAGCTTTTGATGAGCTGTTGTTAATGAAAAGAGGAGGAC
AAGTCATTTATGCAGGGCCTCTCGGACATCATTCTCGCCTATTGATTGAGTATTTTCAAT
CTGTTCCAGGAGTTCCAACAGTAAAAGAGGGATATAATCCGGCTACTTGGATGTTGGATA
TCACCACTCCAGCAGTTGAGGGTCAACTAAATGTGGACTTTGGAGACATTTATGCGAACT
CGGATCTATATAGGCGGAATCAAGAACTAATCAAACAACTAAGTGTTCCAGTACCAGGGT
CCCAAGACCTTCATTTCCCTACGAAATATTCACAACCGTTTGTTGATCAGTGCAAGGCTT
GCTTTTGGAAACAACACTTATCCTATTGGAGACATCCGCAATATAATGCCGTAAGGTTTT
TCATGACAGCAATTATAGGGATCATATTTGGAATTATCTTCTGGGATAAAGGGAACAAAA
TGTACAAACTGCAAGACCTATTGAATCTACTGGGAGCTATGTATGCTGCTGTTATGTTCC
TTGGCGGAACAAACACTTCAACTGTGCAGTCAGTTGTGGCGGTAGAAAGAACAGTCTTTT
ATCGAGAAAGAGGAGCAGGGATGTATTCTGCGCTGCCTTATGCATTCGCTCAGGTGGCCA
TAGAGACTATCTACATCGCGATCCAGACTGTTATTTACAGCCTCCTTCTGTACTCAATGA
TCGGTTTTCACTGGACTGCTGCTAAATTCTTTTGGTTCTATTTCTTCATTTTCATGTGCT
TCGTTTACTTCACAATGTACGGAATGATGCTTGTAGCACTCACTCCAAACTACCAGATTG
CTGCCATCGTCATGACATTCTTCCTCAGCTTTTGGAACTTGTTCTCTGGTTTCCTTATCC
CTAGACTGCAAATTCCAATATGGTGGAGATGGTATTACTGGGGTTCTCCAGTAGCATGGA
CGATATACGGTCTTGTAACATCTCTTGTAGGTGACAAGAACGATAACGTTGAGGTACCAG
GCGTTGGCGAAATACCATTAAAGCTATTTTTAAAAGATTATTTGGGATTTGAGTATGACT
TCTTGGGAGTTGTTGCTGTTGCTCATGTTGCTTGGGCTGTTCTGTTCTCCTTTGTTTTTG
CTTATGGCATAAAGTTCTTGAATTTCCAAAGGAGATAAATTAACTTGAAGACAATACATA
GTTTTGTGTACACATAAATGTTATCAAACTTGTGTTGGATCCTTCAAGAATGCACTACTT
TTGGAGGATCTAACACGTACCTGGTAACATTTTTGAAGAATTCAAGCAATATAGATCATA
TATTTATTTAATTTTGATGTATAAATTTCTCTTCAACTCTTGTGATGTTAAATAAGTAGA
ATGCACACATACGAGGTATCAAATGGTCGGGCGGGTTGTGTTACATTTGTATGGATTAAA
ATCGGCGTTCAACTTAAAATCTCTTCTTT
