Microarray Probes on PGSC0003DMT400060273
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14145_PI426222305 |
JHI_St_60k_v1 |
CACACGAATACTACGAATTCCATAGGCCTGTCCTTTGGTAACAACACCATCACCTAAGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400060273
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400060273 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G21400.1 |
-2 |
1e-36 |
94 |
44/85 (52%) |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:7493492-7496240 FORWARD LENGTH=472 |
Transcript Sequence (924 bp)
>PGSC0003DMT400060273 924 pgsc_dm_v3.4
AATGTTTTGTCTTTTCTTTAAGAAAAAATAAATCTTAAATTATGGTAAGAAAATCAGGAC
AAAACCCTAACACTAATTACATTAACTCTTTGGATAATTTGCATTTTCATATCATAGACA
AGCAGTTTCAACTAGAGAGGAACATCAGTAGGATAATCCTGTGGATGTTTTCGGATTGTT
TCACGAATAGATATTTCTTGTTCTTGGAGGTTGGCTGGAGAAACATCATATACATCTGTA
AATACATCCTTAATTGGGGGCTTCTCTTGTTTTTCTGCAACTTGAATGGCTTGCAATACC
TGTATCACAACATTGAAAGCAGACTTCAGAAAACCAACAGTGGGAGCCGGCTATATGAAA
TTGTTACTGGTCTATGTTGCTCCATTTAAGTCCGTCTCAGTCTAACTGTAACTTATCTAA
TCTAGAAATACTTCGTTAGATTTCTGCTCTATAAAGCTATTCATGCAACAACGAGCAAAC
TTTACCTGCTTCCTGATATTACTGCAAAGTTCGGATTCAACCTGAGAGTTCAACCAGCCT
TCTCTTTCAATCCATTTCCTAAATCTGCTTACAGGGTCTCTTTCTCTTCTCCACCAGTCG
ATTTCTTTAGCTGGACGATATTTGGTTGAGTCATCTGAGGTTGAATGATGTCCTGCTCTA
TAAGTAAGAGCCTGTTGAACATAAAAGAAGCACTTAACAACACTTCCAAAACTAGCTACA
ACAAAAAAAGACAAGTGATTCTCGTTGTCTACTAAGCCTCAATTCCAAACAAGTTACCTC
AACTAGAATAGGTTTATGTTCAGTAACAGCCATTTTTCGTGCCTCATGGACAGCGGTGAA
AACAGCAAGAGCATCGTTACCATCCACACGAATACTACGAATTCCATAGGCCTGTCCTTT
GGTAACAACACCATCACCTAAGTA
