Microarray Probes on PGSC0003DMT400059045
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24159_PI426222305 |
JHI_St_60k_v1 |
CATTTTGTGAAAAGATCTATTTGGTGTGATCGCGTCGTTACCGTAGTATTTTCTTCTCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400059045
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400059045 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49360.1 |
+3 |
2e-63 |
217 |
112/206 (54%) |
beta-xylosidase 1 | chr5:20012179-20016659 REVERSE LENGTH=774 |
Transcript Sequence (1027 bp)
>PGSC0003DMT400059045 1027 pgsc_dm_v3.4
AATAGTTTGGAAATTTGCTTATTTCAGGGGGGAAGCTTCCAATGACATGGTATCCACAAG
ATTATGTAGCTAAAGTGTCCATGGCAAACATGGACATGAGAGCAAATCCAACAAAAGGCT
ATCCTGGTAGAACCTATAGATTCTACAAAGGCCCAACAGTTTTCCCATTTGGGGCTGGCT
TTAGCTACACAACATTCAGCCAACATTTAGTCTCCGCGCCAATCACTGTTTCAGTGCCAA
CCACTCTTCACTCTCATGATCTTGTATCGAACAACACAACAACATCATTAATGAAAACGA
AAGCTACAGTGAGAACAATACATACTAATTGTGAGTCACTTGATATAGACATGCATATTG
ATGTAAAAAACATAGGGGACATGGACGGAACACACACGGTCCTCATTTTCTCAACCCCAC
CTGATCCCACGGAGACAAAACAACTAGTCGCGTTTGAGAAAGTTCATGTCGTGGCTGGGG
CTAATCAGAGGGTCAAGATCAATATGAATGCTTGCAAACACCTTAGCGTAGCTGATGAAT
ACGGAGTACGAAGAATTTACATGGGAGAACACAAAATCCATGTTGGTGATGACCTCAAAC
ATTCTATAACCTTTCAACCTTCATTGGAGGAGATCAAAGTCTAAGAATACTTTCAAGGAC
TAAGTATTCTTGCAATTAATACTTGTTAATTATTTCTTTCCCCTCATCATAATAAAAGCC
AACAAGAAGTGTGAAGAAGCTCTGTTGTTTGGGAATGAGAGGGAAAGGTTAGAAACAATA
TTAGGGATTTGGGATATAATTAAGACAAAAGTTATACCAAGTGTTGATTGGGTTCAACAT
AATCAAATGTGACATAGAATTTCAGAATGAAGCATTTTAACACCTTGTTTGGATGATTGT
TTTCCATTGTAAGTTTAAATATAATGTTGTTGTATAATATCGTTTAAATCCATCAGACTG
AAAGTCCCATTTTGTGAAAAGATCTATTTGGTGTGATCGCGTCGTTACCGTAGTATTTTC
TTCTCAT
