Microarray Probes on PGSC0003DMT400058534
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36159_PI426222305 |
JHI_St_60k_v1 |
GCCAAATATGCTCAAAATACTCTTGTATGTACAAACTAGAGGACACTAGCTATTCACTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400058534
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400058534 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G45680.1 |
+1 |
8e-58 |
199 |
137/323 (42%) |
TCP family transcription factor | chr2:18820717-18821787 REVERSE LENGTH=356 |
Transcript Sequence (1709 bp)
>PGSC0003DMT400058534 1709 pgsc_dm_v3.4
AAAAGAGAGACTATCCTATTCATGCCCCCACCCCTCTCCTTAAGTAGAGGCCCCTCCTTA
TTATGGTGGGGACCTTATTATAGTGAAGGAGTGAGAGAGGGCCACATTTTAGATCCATTT
TTCCTACACCAATTGTAGGACCATTTGTGGCAGTATGGTCCACTCAGAAAAAGTCACACT
TTTCTTACCCCTACACGTGTCATCATCCCACTCACTCTTCCTTTATATACCTCTTCAACT
TCAACCGTCTGATTCATCCTCCATTTCCATTACTCACACCTTTTGTTCTTCTTTTTTTCT
AAAAAAATGTCCAGTTTTCATGACCCAGATGATGATTGTGGCACCTCCGAGCTCAGCAAC
GACGTCGCCGGAGATCTAAATGACCGGAAAATGGACGGTGATGGAGTTGCCGATGAGAAA
AAACTGGTGTTTTCCGCTATGAAAGAAGAACCGTTTGATTCCGATCATCATACTTTGGTT
CCGTCAATGCCTATGCCGGTGGCTACCACCGCCGCGCCGCGGAGATCCTCCACCAAGGAC
CGCCACACAAAAGTAGAGGGACGTGGACGGAGGATCCGAATACCTGCTACATGTGCGGCT
CGGATCTTCCAATTGACCCGAGAACTAGGTCATAAGTCCGACGGAGAAACTGTTCGGTGG
TTGCTTGAACATGCGGAGCAATCTATAATTGAAGCCACCGGAACCGGAACTGTACCGGCG
ATAGCAGTTTCTGTCAACGGTACTCTTAAGATTCCGACGAGTTCTCCGGCGAGTAATCGA
GAAATCGACGAGAACAATCCACAGAAACGTAGAAGGAAATCATCAAACTCGGAGTTCATT
GATGTTGGAAGTTTGAATAGAAATGCAGCAAATGTTTCACAATTTGCTCCGGTAACAACC
ACGCCGGCAACAATACCTGCCGCTGCCGCCGCTCCGCCGCCGGGATTACTACCGATATGG
ACTATGAGTAATGGGGGTATGATGGTACCATCCAATGCCATTTGGATGATACCAGCAACG
GTCCCACCAGTAAACGTGACCAATAACAATAACGTCATGGTGCAGTATCCTCAATTATGG
ACACCTGTATTTAATTTGGCCACGAGGCCAATATCATCGTTCGTGGCTGCACCAACAGCT
GCAGCCACGAATAATATTAGCGGTCCGCCACCAATAATGATGGCAGGACCGTTAACTATA
AATGATGGAGCAGCAACATCTACGGGGCCTAAAATTGGGTCGAACAAGTCTAGCATGGCT
CCAGCTAGTTTAAGCTCTAGCACAGATAGAAATAACAACAATAAAAATGATAAACCTCAT
ATGCTAAGAGATTTTTCACTTGAAATTTATGATAGAAAAGAGTTACAGTTCATGAGTCGA
AGTGGAAATCATCAACAAGAACCTCAAGTTACATCTTCAAAGCGGTCATAGAGAAGACGG
GTTAATGGGCGATCAAGAAGGTCTATGGCTTAAAATCGATTCAAGAGATCGATCCTACGT
CATAATTCAATATAAAGATAGAGGCAGAGTTTAGGCCAAATATGCTCAAAATACTCTTGT
ATGTACAAACTAGAGGACACTAGCTATTCACTTTTTGTTTCTTTTGCTTTTGTTAAACTA
ATGTTAATTAGAAGTTGAATGATGTGCAACTCTCTTAGGAAATTTCAAATAAATCATTGT
ATAATTGTCAATGGAAACATTATCATCCT
