Microarray Probes on PGSC0003DMT400057529
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15824_PI426222305 |
JHI_St_60k_v1 |
GCAGATTTCACAGAAGAAGTGTAATTGGATTTTCACCTAACAGAACAGAGGAAAATATTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057529
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057529 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54470.1 |
+1 |
7e-37 |
133 |
59/90 (66%) |
B-box type zinc finger family protein | chr5:22114584-22115315 REVERSE LENGTH=215 |
Transcript Sequence (890 bp)
>PGSC0003DMT400057529 890 pgsc_dm_v3.4
CTTGTAGGCATTTACTATATTTCTTGTAACATCATAATCTCCAAAGACCTAAAGCTTGAC
CCAAATTTGAGATAGAAAAATTATAAAAATCTTTTTTTTTTTAGTGACTCTATATGTGTG
ATAATAACAATGAAGAAATGTGAGTTGTGCAGTTCAATAGCAAGAGTTTATTGTGAATCA
GATCAAGCCAGTCTTTGTTGGGATTGTGATGCCAGAGTTCACACAGCCAATTTCCTTGTG
GCTAAGCATTCAAGAATTCTTCTATGTAATTCTTGCCAATCACTTACCCCATGGAGTGGC
TCTGGCTCTAAGCTTGGTCCCACTGTTTCTGTTTGCCAGAAATGTTTTCATAGAAATAAT
AATGATGGCGAAGATCAAGATCTTAATGATCATAATAATGATGATACAGAAGGAGAAGAT
GATGACGAGGACGACGACGACGAAGAAGAAGACGAAGATGATGGAAGCAGTGATGGTGAT
AATCAAGTTGTTCCTTTGTCTTCTTCAACTACAGATCAACCTAATCCTCCCTCTTTGACT
TCAAGCTCTTCAAGTAGTGAAGATTCCACTAGCAGATTTCACAGAAGAAGTGTAATTGGA
TTTTCACCTAACAGAACAGAGGAAAATATTCAATCCCATTATTGTGGGATTACAAGACCT
GAAGAGAAGGTAGAAAGGAGGAGTTCATGGAGATGGAGATAATTATTAAAGAAGGGATAT
TTACAGATCAAAAGCTAATTCTGTTATCTGATCAATGTATGAATAAATCTTCTTGTAAAT
GACATGTGAGTTAGCTAGTCTTTCTTGTTCCCATTTGCTCTTACTTGAAATCTGTATAAT
GATTTTACTGCCTACACTAATTTTTTAATATATATTTATCCTAATTTTCT
