Microarray Probes on PGSC0003DMT400057033
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14974_PI426222305 |
JHI_St_60k_v1 |
GCATATATGTAATTGTTGAAGCGTTTCACGTCGGATGAAATAGGGATATGTGGTTTTCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400057033
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400057033 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G55850.1 |
+1 |
1e-144 |
436 |
207/388 (53%) |
cellulose synthase like E1 | chr1:20876752-20879414 FORWARD LENGTH=729 |
Transcript Sequence (1494 bp)
>PGSC0003DMT400057033 1494 pgsc_dm_v3.4
CAATGTTCAGCTCAGGGTGTCCTCAGAGATCAGCAATGCGCCAGTAATTCTGAATGTAGA
TTGTGATATGTACTCGAACAACTCAAACGCGATTCAAGATGCTCTTTGCTTCTTTATGGA
TGAAGAAAGAAGTCGTGAAATTGCTTTTGTGCAATTTCCACAATCTTTCGGAAATGCCAC
TAAAAATGAAGTTTATGGTTCTCTGAGAGTAATTGATGAGGTTAGTACACTGTACATCTC
TATTTGGTTTTATGGTGTTGATGAATATTCATTGCTGTAATTTTCGTATCGTTACTTTTA
TGTCAACCTAAGGTGGAATTCCACGGTGCTGATGGTTACGGAGGCCCTTTGTATACTGGA
ACTGGCTGCTTTCATAGGAGAGACACCCTTTACGGTAGAGAGTATAGCACGGAAGCTAGG
ATTGATTTGAAGAGTGCATGTCCTGAGAAGATGGAAGAAAACGTGCACGAGTTAGAAGAA
AGACTAGAAAGATTAGCTAGTTCAACGTACGACTTAAACAACACTCAATGGGGAAATGAG
ATTGGTTTGAAGTACGGGTGCCCAGTCGAAGATGTACTGACCGGGTTGACAATTAAGTGT
AAAGGTTGGAAATCTGTTTATTATCGTCCAAAAAGGGATGCCTTTGTAGGGGTTACTGCA
ACAACGTTGGATCAAATATTAGTGCAACATAAGAGATGGTCCGAGGGCGATTTAATGATT
CTGTTTTCTAAGTATAGCCCTGTTTGGTATGGACTTGGAAAGCTCAATCCTGGCCTTGTG
TTGGGATATCTCATTTACTGCCTCTGGTCTCCGAATTGCTGGGCAACTCTGTACTACTCT
ATCGTCCCTTCGTTTTGTCTACTCAAAGGAATTCCCCTATTTCCACAGGTCTCCAGCAAA
CGGTTCTTGCCATTTGCATATGTGCTAATCGCGGAACTAATATATAGTTTTGCTGAGTTC
CTGTGGAGCGGAGGAACAATTCTTGGATGGTGGAATGAACAAAGAATATGGCTTTACAAG
AGAACAAGCTCCTACATGTTTGCCTTTCTTGATACAATGTTGAAGTTATTTGGTTCTTCC
AATACAACATTCATAGTCACTCCAAAAGTCACTAGTGAAGATGTGTTATTGAGATACAAA
CAAGAGAAAATGGAATTTGGAAGTGCTTCACCTATGCTTACAATTTTGTCAACACTGGCA
ATGATCAATCTTTTTTGCCTAATGGGGTTGGTGAAAAAATTGATATTGACAAGAGAACTT
GGATTGGAATATGTATTTGAAACTATGGCTTTGCAAATTTTGCTTTGTGGGATTCTTGTT
TTTGTTAACTTGCCTTTGTATAATGCTCTCTTCTTTAGGCAAGATAAGGGGAAAATACCT
AGTTCCACTGCATTTCAGTCAGTTGTTTTTGCCCTTTCTGTTTGCACATGTATTGCATAT
ATGTAATTGTTGAAGCGTTTCACGTCGGATGAAATAGGGATATGTGGTTTTCTT
