Microarray Probes on PGSC0003DMT400055832
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48448_PI426222305 |
JHI_St_60k_v1 |
GAACAAAGAGGGATTTTGCTTTCTTATGTGTTGTATGAAATTGATTGGTGGGAGATTAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055832
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055832 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G28290.1 |
+1 |
1e-06 |
44 |
19/21 (90%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14012032-14012464 REVERSE LENGTH=80 |
Transcript Sequence (511 bp)
>PGSC0003DMT400055832 511 pgsc_dm_v3.4
AAAAAAGAAGAAGAAAAAAAAAACAAATTTACTTTCCTCCAAAAAATGAAGAAATCAAGT
ATTTTTGTAGCTTCCATAACTGCAGTTGCTATTTCTTCTTCCAATTCTTCATCCAAAGTT
CGAATTTCTCATCATCAGGATGAAAGTTCGTCGAAGAAGAAGAAGATGGAGGAAGAAAAT
TCATCGAAGAAAATGGGAGAATCAAAATCTTCTTCAGATAAATTTGCACCAAAATTTGAT
GGATTGAGATTTATTGAAACTTTGGTTACAGCTCACAGATAAGTTTACAAGAGGGAAACA
AATAATTTTTGACAGATTTATTAGGGAAAATATTATCTGAGGAAAATGGAATATATGAAG
GTGAATTGTTGTTTAATTAGCCAATTTGATGACTTTTTTTTCTTTTTCTTTAATTTGGTA
CTATGAATGAAGAGATTGAAGGGAACAAAGAGGGATTTTGCTTTCTTATGTGTTGTATGA
AATTGATTGGTGGGAGATTAGTAATTTTTCC
