Microarray Probes on PGSC0003DMT400055643
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45735_PI426222305 |
JHI_St_60k_v1 |
CTGGATATACTGTGTAACCCTGTCCTAACTTCTAGATGCGATAAATACTTATCTCAGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400055643
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400055643 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G13340.1 |
+2 |
8e-32 |
121 |
54/84 (64%) |
Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447 |
Transcript Sequence (705 bp)
>PGSC0003DMT400055643 705 pgsc_dm_v3.4
AAAAAAGAGCCTAATATGTTGATGACACTTGCACAATTATATACCCAAAACTTCAAGAAA
TGGGTAGCATCATAGCGGCAAATTAAGCCACACATATATATAATAGTAATACATTGCAGC
AGAAGAAGAAAAAATCTATTTTGGGTATTTTTGAACGAGCTATTTTGATCCAGAAAAAAG
ACAATCTTTTGCTTGAAAGGTGTGGGAAGGGATGCCTCTTGAAAGGGTTGAGCAATTGGA
TTACATGGCAGATGACCAGGAGGGGACTGATTCATGTGATGAATTTGAGGGGGAGTTGGA
TAATGAGGAAATAAACCTTGATGACGATGATATGCCAACAAAAGTGACTGATACATCAGC
TGCACAAGCAAGAAAAGGGAAGGATATACAAGGTATCACATGGGAGGGATTGAATGTAAC
CAGGCAAAGCTACAGATTGACAAGGCTCGAACAGTACAGAAATTATGAGAACATCCCTTT
GTCAGGGGAAGCTGTGGATAAGGAATGCAAACAAGTGGAGAAGGGTGGTAACTACTACGA
ATTCTTTTACAATGCAAGATCCGTGAAGCCTACGATACTCCATTTTCAGGTCTGCATTTA
TTCTGCAGATTAAGCATACCATATGATAACCCTGTGCTGCAGATTCTGGATATACTGTGT
AACCCTGTCCTAACTTCTAGATGCGATAAATACTTATCTCAGGTG
