Microarray Probes on PGSC0003DMT400054793
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38119_PI426222305 |
JHI_St_60k_v1 |
ACATGATTCTTCTGAGGATCTGAGTAACATTGTTGATCTGTAGACGAAGACGGAGATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054793
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054793 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G50930.1 |
+1 |
2e-139 |
419 |
235/496 (47%) |
cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576 |
Transcript Sequence (1614 bp)
>PGSC0003DMT400054793 1614 pgsc_dm_v3.4
AAAGAATCTCATTTTCTCAATTTCACAACAAACACATACAAAATAAAAAATAAAAAAATG
TCTCCTGAAGAAATGTCTAATATGAAATCGTTAATATCGACTATTGCATCTGTTACTGCA
ACAGCTATGCTCGTTCGAAGCATAGCTAGTGACTTTATCCCAAAGGAATATAGTAGTTGT
GTCTTTGATAGCTTTCACAACCTTTTTCATCGTTTCTCTTCACAATTCACTATCTTGATT
CATGAATTCCAGGGTCCGTCTCCAAACCTAGTGTTCGAGGCAGTTGAGGTGTATTTAGGA
ACTATAGTGAACTCTTCTACTAAGAGTATTCGATTAGGAAAGACGGAGAATGACAAAGGG
CTAGTTATTACAATGGATAAAGACGAAGAAATCATAGATGTTTTTGAGGATGTTAAGGTG
ACATGGAGGATGGAATGTAGACGAATCGAGTCAGGGAGTCAGAATGATGAGATAAAGGAT
ATGATAGCTGCATTGTGTTCGGAGCTAAGATGTTATGAGTTGAAATTTCATAAGAAACAT
AAGGAGAAAGTGATGAAATTGTATTTACCTTACATTATGGAGAGATCAAAAACCGCGAAA
GAAGAATCCAGGGTTATAAAATTGTATTCTAATTTCAGGAATTGGGGTTCTGATGGAATG
AATCTCGAACATCCTATGACATTCGATACTCTAGCTATGGATGAAGAAGTAAAAACCACG
TTAATTCATGATTTGGAAACTTTTATTAAAGGGAAAGAGTACTATAGCAGGATTGGTAAA
GCATGGAAAAGAGGGTATTTGCTTTATGGACCTCCAGGAACTGGTAAATCGAGTTTGATT
GCTGCTATGGCGAATCATTTGAACTATGATATCTATGATTTAGATCTTACAGAAGTATGT
AGCAATTCAAATCTTAGATCATTGCTACTTGGTATGTCTGGTAGGTCAATACTTGTCATC
GAGGACATTGATTGCAGCATCAATTTAGAAAACAGAGAAAAAAACGATGGAAAGGAAAAT
AAGCACAACAAAGTGACTCTGTCAGGGATACTTAATTTTCTCGATGGGTTATGGTCGTGT
TGTGGAGAGGAACGGATAATTGTAGTTACGACTAATCACATTGATAAACTAGATGCAGCA
TTGTTGAGACCTGGACGAATGGATATGCACATCAACATGTCATACTGCAAGTCATCGGCG
TTTAAGCAATTAGTTTTCAATTACTTAAATATTCATGATCATGAATTGTTTGATCAAATC
GGAGAGCTACTAGAAGTTGTGGAGGTTACACCGGCAGATGTTGCAGGGGAACTGTTGAAA
AGCAAGGATCCAACTATATCCCTTCGAGGACTTATTGAATTTTTGAAAATAAAATTGCAC
AAGGAAGAGATGTTGAAATCGGAAAATGGAGTAGCAGAGGCAGAGGAGGCATTTAAAGAT
GAAACGAAACATGAATCTATACATGATTCTTCTGAGGATCTGAGTAACATTGTTGATCTG
TAGACGAAGACGGAGATGTATTTTTTACTCTTTTTTTTTTCTTTTTCTTTCTTCTTCTTG
TTTTCTTGATGAATAAATAGGTTCTTGAAGCTAACAAGTATTTTGAGCTCTCTG
