Microarray Probes on PGSC0003DMT400054443
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24527_PI426222305 |
JHI_St_60k_v1 |
GGGTTAGTAAAGTTTGATCATGGAAATATTTGATTAATTAGGTGTTGCCCATAGAACCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054443
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054443 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G40010.1 |
+3 |
0.0 |
536 |
279/467 (60%) |
AAA-ATPase 1 | chr5:16020218-16021762 REVERSE LENGTH=514 |
Transcript Sequence (1800 bp)
>PGSC0003DMT400054443 1800 pgsc_dm_v3.4
AATTTATATCCCAAAGTGAAAGAATTATGATGATGATGCAAGATGTTTGGAATCAGTTAG
GTCCAGCCATTGCAACAATCATGTTTGCCTGGACCATGTACCAGAACTATTTCCCTCATG
AACTTCGTGGTCATCTTCGAAGGTATACCGATAAACTTGTGAGCTATATCTATCCTTATA
TACATATTACATTTCATGAATATGAAACTGATGGTTGGTTTGAGCGTAGTAAAGCTTATG
TAGCTATCGAAAGGTATTTAAGTAAGAACTCCAGTATACAAGCTAAGCGTCTAAAAGCCA
GTGTAGTGAAAGATGGTCAATCTCTTGTTCTATCGATGGATGATCATGAGGAGGTAACAG
ATGATTATGAAGGGGCGAAGGTTTGGTGGATATCTAGCCTAAAAGAAGCTAATAGACCGA
CACTTGCTTGGTACGCGAAGGAGGATGATAATAGGTATTTCAAGCTTAAGTTTCATAGGA
AAAATCGTGATCTTTTAACCATTTCATACTTAAAATATGTGTTGGATGAAGGGAAGGCGA
TTTCTGTTAGAGAAAGGCAGAGGAAATTGTACACGAATAATAAGGGATCGGATGGTGGAT
TTGGTGGTTATAACAGGAGAATGTGGAGTCAAGTAGTGTTTGAACATCCGTCAACATTTG
ATACTTAAGCTATGGAGCCAAACAAGAAACAAGAGATTAAGGATGATCTCGAAACATTTT
CTAAGTCAAAAGACTACTATGCTAAGATTGGTAAGGCGTGGAAGCGTGGTTATCTTCTTT
ATGGTCCTCCAGGAACAGGTAAGTCTAGCATGATTGCTGCTATGGCTAACTTTTTGCAAT
ATGATGTCTATGATCTTGAATTGACAGCCGTTAAGGACAACACGGAGCTGAGAAAGTTAT
TGATAGATACTACTAGTAAGTCTATCATTGTGATTGAAGACATTGACTGCTCCCTCGATC
TTACTGGCCAAAGGAAGCCGAAGAAGGAGAAGGAGAAGGACGAGAAAGTTGAGAAAGACG
TTATCAAGGAGGAGTTGAAAAAAGCAGGAGAGGAGAAAAAGCAAAGTGAGGTAACTTTAT
CTGGGCTTTTGAACTTTATTGATGGTTTGTGGTCTGCTATTGGTGGTGAAAGGCTTATTG
TTTTCACAACCAATTTTGTCGAAAAGCTTGATCCTGCTTTAATTCGAAGGGGGAGAATGG
ACAAACACATTGAGCTATCATATTGTTGCTTTGAATCCTTCAAGGTGCTTGCAAATAATT
ATCTAGACGTTGCGTCTCATGATGATTACTTTCCTGAGATTCATCGCTTATTAGGGGAAA
CTAATATAACTCCTGCTGATGTTGCTGAGAGTTTGATGCCCAAATCTTCTAAGGAAAATG
CAGACGCTTGCTTGGAGAGGTTAATTAAAGCTATTGAAACTGCAAAGGTGGAAGCAAAAT
TGAAGGCTGAGGAAGAAAAGACCGAGAAGGAGAAGGAAGAGAACGAGAACGAAAAGAAAA
AGAAAGAAGCAGCTGCTGCTGAAGACGCGAAAAAGGCTGATGATGTGAACGAAAATGGGA
CGTCGATGGAGACTAAGGAAAAGCCAGAGAGTGATGGTGCTAAGGAAAATGGCAAGTCTG
AGATAGTAATGGACTAATGGTGATGTTAGTTAAGGGTTAGTAAAGTTTGATCATGGAAAT
ATTTGATTAATTAGGTGTTGCCCATAGAACCAGATTCAGTTATTTTGAATAATTTTGTTG
TTGAGCATTGTTGAATTTGTTATTCAAGAGATAGTATGATGATATAAAAAGTGGTTGTTG
