Microarray Probes on PGSC0003DMT400054318
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52514_PI426222305 |
JHI_St_60k_v1 |
GATACTAACCCTCCATCTCTCATTACCGATGTACTCATTTTCGATATGAATAATACATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400054318
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400054318 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46240.1 |
+1 |
2e-65 |
220 |
110/186 (59%) |
potassium channel in Arabidopsis thaliana 1 | chr5:18743652-18746561 REVERSE LENGTH=677 |
Transcript Sequence (948 bp)
>PGSC0003DMT400054318 948 pgsc_dm_v3.4
ATGATTTTTGTTGTGTCAGAGGATAATGTAGAAGTAGCTCAAGAATTCGCAAAACAGAAT
CAGTTGTCACCAAGGATACAAGATCAGATTTTGTCTCATATATGTCTTAAGTTCAAAACT
GAATCATTGCAACAAAAAGAGACCATGAATGTTCTGCCAAAAGCTATCAGATCAAGCGTT
GCACTTTACCTGTTTTTACCAATAGTTCAAAATGTCAGTCTGTTCCGAGGTGTTTCCAGG
GACCTGCTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATACTACCCTCCCAAGGAAGAT
GTGATTTTACAGAATGAGTCTCAAACATATTTTTACATAATAGTCTCAGGAGCATTGTAT
CTTCTAGTAGATATCGATGGATGTGAACAAATCATTGGGAAGGCTGTTGTTAGAGAATCA
TTTGGAGAAATAGGTGTTTTACTTGGAAGGCCACAACAATATGCTGTTAGAACAACTAAA
ATTTCTCAAATTTTATGTCTGAGTAGGAAACCATTTCTGAACATTCTTCGCGACAATCAA
GAAGATGAACGGATTAAAATGAGAAATCTTGTTCAGAAAACTTTATTTCTTGGTCGTGTG
GCTAGCCCGTTGTTGGCCGAGATCATAGGGGTGTATGAGGCTCTTAGTTGGCTAAAGGAA
CGGTTCAGTAGAACGAGGTTGGTTGTGGAAACTGATAATCTACTTGTGAAGCAAGCTCTG
GAAGAAAACTTGGTGAATTACTCTTACTTTGATTCTTTAGTTTTTGATTGTAAAACTCTT
ATCCAAGAGTTACCATTTCTCTCTTTGTCTGCTGTTAAGAAATTAACGAATCAGGTTGCT
CATTGTCTTGCTAGTGCATCTGTTTCTATGTCTGGTTCATTGGAGTGGGATACTAACCCT
CCATCTCTCATTACCGATGTACTCATTTTCGATATGAATAATACATGA
