Microarray Probes on PGSC0003DMT400053143
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29221_PI426222305 |
JHI_St_60k_v1 |
GCGACATAGCTCATAGTTTGAATTTGTTACTTAACCTTTTCTAATCGACTTCACAGGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400053143
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400053143 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G65140.1 |
+3 |
2e-156 |
456 |
249/359 (69%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:26019878-26022077 REVERSE LENGTH=370 |
Transcript Sequence (1715 bp)
>PGSC0003DMT400053143 1715 pgsc_dm_v3.4
CCGCTCTTCATCTCTTTCTCCTATATTCCAATCCCAATTTGTTTTTCTTTCTTTCTTCTT
CTAGTAACTAGTAAAGGAAAGGAAACTCTTCTTCCCTTTGCTTCTCTTATTTTCACTCAT
ATCTTTCCTCTTAATTCTCATTCTCATTCCCATTCCCATTTTACTCACATAAAACAGAGT
AACACACACTGTCTTCTTTCTTCTTCAAGATTCCAACTATTAACTGATTAATTGAACGAA
ATTTAGGAGTGACAATGACTCAGCAGAATGTGGTAGTATCTGATCCCAAATCCGGTATTA
ATCTGACAATACCGGTATCGAACTCGTCGGCGTTATTCACGACGGCAGCTCAGAAGCCGC
CGCCGGGGCCGGGGCCGGGGAGTTGTATAACTATTTCAAGAAAGACACTTGTTGAAATTA
ATGGGAATAATAGTGCTAGAATCAATTCTTGGGTTGAATCAATGAGAGCTTCCTCTCCTA
CTCATCATAAGTCCAGTCCTGCTCTTTCAGATGACTTGAATTCTTGGATGGTGCAACATC
CATCAGCACTGGATATGTTTGAGCAGATAATCAGTGCTTCAAAGGGAAAACAAATTGTGA
TGTTTTTAGACTATGATGGCACTCTTTCCCCCATTGTTGAAGATCCTGATCAAGCTTTCA
TGTCTGATGCTATGAGAGCAACAGTGAGAAAACTTGCTAGATATTTCCCTACTGCAATAG
TGAGTGGAAGGTGCAGAGACAAGGTATACAGCTTTGTACGATTGGCAGAGTTGTACTATG
CTGGTAGCCATGGAATGGATATAAAAGGGCCATCAAAAGGTTCCAAATACAAGAAAGGAG
CTCAAGCTGTTCTTTTCCAACCAGCAAGTGAATTTCTCCCTATGATTGATGAGGTTTACA
AAAAACTTGTAGATATAACAAAGTCTACAGAAGGAGTTAGAGTTGAAAATAACAAGTTTT
GTGCCTCTGTACATTTCCGCTGTGTTGATGAAAAGAAATGGGGTGAACTAGCACAAGTAG
TAAGATCAGTGCTTAAAGAATACCCAAAGCTTCGATTGACACAAGGAAGAAAAGTATTAG
AGATTCGTCCAACTATTAAATGGGACAAGGGCAAAGCTCTCGAATTCTTGCTCGAATCAC
TTGGATATGCTAACTGTACTGATGTCTTTCCTGTATATATTGGTGATGATCGAACCGATG
AAGATGCTTTCAAGGTCCTAAGAGAAAGAGATCAAGGTTTTGGCATTCTTGTCTCCAAAA
CTCCAAAAGACACACACGCATCTTATTCTTTGCAAGAACCATCTGAGGTGAGTTGAATTG
CGCTTCTGGGAGAAAATATTTACGCGACATAGCTCATAGTTTGAATTTGTTACTTAACCT
TTTCTAATCGACTTCACAGGTTATGGTGTTTCTACGACGTTTGGTAGAGTGGAAAAAGTT
GTCATTAAGAAGACAATTTCGAATTCGAAGACAAATTGAGGAGATGAAAGCATCTCTAAG
GAACTAAGAATTTGTCCAAAGTGAATATGGACTTAATGATGCATATAATGTATTTTCCTT
TTATCAAATATAACAAAGAAGTATTAAGAAAGAAAAAGGTAGAAAAGAAATTAAAAGCTT
TTCTTTTTATCCTTTTCTCTTTGGCTTTAAGGCCTTGTACATCTTTGTAATTTTCCAGTC
TTGCCTAAATGCATATATTGGAAGTTCTCTCTCCG
