Microarray Probes on PGSC0003DMT400052881
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42426_PI426222305 |
JHI_St_60k_v1 |
TGCAGTCTCTATGATAGACTTACTCGCATCTGGTGTTTATATCAAACTAATGAATGTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400052881
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400052881 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G35350.1 |
+3 |
0.0 |
782 |
461/810 (57%) |
poltergeist like 1 | chr2:14881360-14884116 REVERSE LENGTH=783 |
Transcript Sequence (3164 bp)
>PGSC0003DMT400052881 3164 pgsc_dm_v3.4
AAAACTTCATCAGCCCGCAAAAACATTACAAAAAAAAAACTCAAAACTCCATTTTCTCTC
TCTATATCTATACATACATGTATAGTTGTTTCTCTCTCCATATATCATCACTTTCTCTCA
CAATAAATCCAGGAAACTCAGACAACTACACTCCCTTTCACTTCATCAAGCACACCCACT
TTCTCTTTTTCACTGTTTTTTTTTTCTTTTGCTTTGTTTTTCTGCAAGTGTAGAGATATA
AATTTTGTATATATAGGTGGGGTAGTGGAGGTGGGTGGGTGGGAAATGAATCGAATGTGA
TGGGAGGAGGATTTTCGCAGCTGTTTCCATGTCTTGACCCGGCGGTGAACCGGGGTGAAC
CGGAGGTGATCTTTACCGGAAGTGAACCGCTTGATGAAACACTTGGTCATTCCTTCTGCT
ATGTGAGGTCGTCAGCCCGGTTAGTTTCTCCGACCAATTCAGATCGATTTGTTTCACCTT
CTCAGTCACTCCGGTTTGATGAACCGGGGAGGAACAGACTGACCGGTTCGGCGGAAACCG
GATTCAGAGCGATTTCCGGTGCTTCTGTAAGTGCAAATACCTCGACTCCTAGAACTGTCC
TCCAACTTGACAATATTTACGATGATGCCACTGGTAGTGATGGGAGTGTTGTGGGTTTTG
CTTGTGGTGTAAAGGGTAGTGTTGTCAATGGGTTTGAAAGTACGTCGTCGTTTTGTGCTT
TACCTCTTCAACCGGTTCCTCGCGGCGGCGAACCATCCGGTCCAATGGAAAGAGCGTTTT
TTATGTCCGGTCCAATTGAGCGAGGTGCTCTATCTGGACCGCTAGACACTGCTGCTAGCT
CCGATGGCGGCGGTGGAGTTCCCTTCTCAGCTCCATTAGGTGGAGCTTATGTAAAAAAGA
GAAGGAAGAATGGCATTGCAGGAATTAGGAAGGCATTCTACCGGAGCTTCTCTGAGAAAA
AGCGGCCTTGGGTGGTTCCGGTGAGAAACTTCATTGGGAGAAAGGAAATGACAGCTGCCG
GAAACTGTACTCGTGATTCGGATGCAGGGAGTGATTCAAATGTTCAATGGGCATTGGGAA
AAGCCGGTGAGGATCGTGTGCATGTGGTCGTATCGGAAGAGCATGGATGGCTCTTTGTTG
GGATTTATGATGGTTTTAATGGCCCAGATGGACCTGAATTCTTGATGAGTCATCTGTACA
AAGCAATGTACAAAGAATTAGAGGGTTTGTTTTGGGATAGTGAAGAAACTAGTAATCAGG
AAGCAGAAAATGCAGGTTTAGAAAACGAAGTGATCACTGAGGACTCGAACGAACCAAATT
CAAATCGAGAAGCTAACCCCACAAATAGGGGAGTTGAAGAAGGTGGAAATGAGGTTAATT
TGGAACATCCAGATAAAGGGTCGGAAAAGAAGGTGACATTTCAATCAGGGGAAATAGTGG
TTAGGAGGAGGAGATTGTGGGAATACTTAGCAGAAGCTGAGACAGAGGATGGTCTTGATC
TTTCGGGTTCGGATAGATTTGCATTTTCAGTAGATGACGCGTTAAGTGTAAATAGTGCAG
GTTCAGCAGTTAATAGGAGGTCGTTGTTGTTGTCGAAGTTGAAACACGGATTGTTAATTA
AGCATAAAGAGAGTAAGAGGTTATTTCCATGGAAATTTGGATTGCAAGCTAAAGAGAAAG
TTGAAGTAGGGGAGAATAGAGTAGAAGAAAGGACTAATAGAAGTGAACGGAGGCGTAAGG
TGGGCCCGGTTGACCATGAGTTAGTTTTGAGAGCAATGTCAAGAGCTCTCGAATTCACTG
AACTCGCATACTTGGATATGACAGATAAAGTTCTTGATCGGTATCCTGAGCTTGCATTAA
TGGGTTCATGTTTGTTGGTTGCTCTGATGAGAGATGAAGATGTGTATGTAATGAATGCGG
GAGATAGTCGTGCTATTGTGGCACAGTACGAGCCTGAGGAGGTTAGTTGTAGTTCAGAAT
CAAGAGGTCCATGTAACAGTGAGTTGGCCGTTGAGGGCATTGTTGAAGAACCCATAGTTG
CCGGCGATGAGGAAAGTAGGGTGATGAATGATATACCTATTCAAGCTGCTAAGCTGACTG
CCTTGCAATTGTCTACCGATCACAGCACCAGCATTGAGGAAGAAGTTACTAGAATTAAGA
ATGAACACCCAGATGACAGCAACTGCATTATTAATGATAGAGTGAAAGGCCGTCTAAAGG
TCACTCGTGCTTTTGGAGCGGGCTTCCTTAAAAAGCCTAAATTGAATGAGCCATTGCTAG
AAATGTTTCGGAACGAGTATATTGGGGATGCTCCTTATCTGTCTTGTACGCCTTCGCTGC
GACATCATAAACTGTGTCCTAGAGATCAGTTTTTGGTGCTCTCCTCTGATGGCTTATACC
AATATTTGAGCAATCTGGAGGTTGTTTGTCATATTGAGAATTTCATGGAGAAATTTCCTG
ATGGGGATCCTGCTCAGCATCTGATTGAGGAGCTCTTATTCCGTGCAGCCAAGAAAGCTG
GAATGGATTTACATGAATTACTGGACATCCCCCAAGGAGATCGTAGGAAGTACCACGATG
ATGTTACAGTTATGGTGGTATCTCTAGAAGGAAGAATTTGGAAGTCGTCTGGGAAGTACC
TCTAATGTTACTCTTCCGGCGATCTATTCCATGTATAGTAATATGCAGCGCAATTTTGAT
CTCTTGCTCCGGTTATACCCTTGACTACAACCAGAACTAGTACTAGATATACGACAAGGC
TCGTGAACGTAGAAGTTTTGTAGTTGGGATTGCTCAGAACTGCTCCTAGAAAAGAAAGAA
ACTGGATCTTTTCATTTAGTTTCTTCTTAGATTTTGCATAGTAGATCTTTTCATTCATTC
AAGTTCGTTCTTTCTTTCTTTCTTTCTTTTTCCCCCTCCCATCTCATCTACCCTTTTAGA
GCCAAACAAGTAATTTGTAATCTATAGGGTATAAATATTTATTTTGGAGGTGGATTTCCA
CCAATGTGGTTTACAGAGGAGAGAATTCTTGTTGAACCCTTGTGTAAAAAAGTCTTTACA
GAATGGGGTAAAGGGAAAGGTACAAAATTTCTTTTTATGCTGATTGCAGTCTCTATGATA
GACTTACTCGCATCTGGTGTTTATATCAAACTAATGAATGTAGA
