Microarray Probes on PGSC0003DMT400050493
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42124_PI426222305 |
JHI_St_60k_v1 |
CTTGATAAAAAATAGCGACGGGCAACTTCTGTCGTTAAACAACAAAAATTCAAAATAGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400050493
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400050493 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G35930.1 |
+1 |
6e-146 |
426 |
209/406 (51%) |
plant U-box 23 | chr2:15083101-15084336 REVERSE LENGTH=411 |
Transcript Sequence (1309 bp)
>PGSC0003DMT400050493 1309 pgsc_dm_v3.4
GTGGAAAATATGGAGGAAATTGATATTCCTTCTTATTTTCTATGTCCAATCTCAATGGAA
GTTATGAGGGATCCAGTTACAATATCAACTGGAATAACATATGATAGACAAAATATCGAA
AAATGGTTATTTTCATGCAAACACACAACTTGTCCTGTCACAAATCAAGACCTAAAATTC
AAAGATCTTACTCCAAATCATAATCTACGACGTTTGATCCAATCGTGGTGCATGTTGAAT
TCTTCAAATGGTATCCAAAGGATGCCAACCCCGAAGCCTCAGGTTCAAAGGGCTCACGTT
GTGAGAATATTGAACGAAGCACAAAAATATCCGGATATGGAGTTTAGTTGCCTTAGGAGG
ATCAAATCAATAGCGCGTGTAAGTGAGAGTAATAAAATGTGTCTAGAGTCAGCTGGGGTA
GTTGATTTCTTGACCTCGATTATGATGAAGAAAAAAGAAGAATCAGAGGCAAGTGATGAA
GCTTTGAATATTCTTTTTCATCTAAACCCTTCTGATACTGAGTTGAAAAAGTTAATCAAC
TCGCAAAATGATCATCATTTCTTGGATTCTTTACTTCAATTCTTGAATAATGGTCATGTT
CAATCACGAACAAACGCGATAGCCCTATTGAGATCAACCCTCAATGTGGCTGATCCATCA
CAATTAATTGGTATACAACCAGTGTATATCAAGGGTATAGTTTGTATATTGAATGACAAA
ATCTCTCAACAAGCAACAAAAGTAGCACTTAAGCTCCTAGTTGAGTTATGTCCATGGGGA
AGAAATAAAATAAAAGCGGTTGAAAATGGAGCTGTGTTTGCCCTAATTGAACTTCTTCTT
GACACAAATGAAAGAAGGGTTTGCGAATTGATACTAACGGCTCTGGATCATTTGTGTACT
TGTGCTGATGGGAGGTCGGAGTTGTTGAGACATGGTGGAGGAATAGCCATTGTTTCCAAG
AAAATTCTTAGGGTTTCACATTTGGCAAGTGATAGAGGAGTGAGGATCCTTTATTCAATT
TCAAAATTCTTAGCAACTTGTTATAGTACTAAAGTTCTTCAAGAGATGTTGCAAGTGGGA
GTTGTGTCAAAGTTGTGTTTGGTTCTTCAAGTGGATGTTAGTCCAAAGACTAAAGAGAAA
GCTAAGGAAATTCTAAGGTTACATTCTAGGGTTTGGAGGGATTCTTCTTGTATTCCTCCT
CATTTGCTCTCTTCTTATCCTTGATAAAAAATAGCGACGGGCAACTTCTGTCGTTAAACA
ACAAAAATTCAAAATAGGGTTATCATAAAAAAAAAAATCTTATTAGCTA
